RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 GPD2P43304 727 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 VEGFBP49765 207 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 EPHB4P54760 987 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 NNTQ13423 1086 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 ZDHHC17Q8IUH5 632 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 KATNAL2Q8IYT4 538 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 CRYBG2Q8N1P7 616 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 TNIP3Q96KP6 325 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 TWNKQ96RR1 684 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 NCAPGQ9BPX3 1015 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 RAB17Q9H0T7 212 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 KLK14Q9P0G3 267 aa16.25■□□□□ 0.19
SGCE-205ENST00000437425 CTSHP09668 335 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 DESP17661 470 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 GRK4P32298 578 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 GBP1P32455 592 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 PSMC1P62191 440 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 PDCLQ13371 301 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 SOWAHAQ2M3V2 549 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 PTPN20Q4JDL3 420 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 SLC13A5Q86YT5 568 aaPredicted RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 SLC43A3Q8NBI5 491 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 OR6B3Q8NGW1 331 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 EXD1Q8NHP7 514 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 SPATA18Q8TC71 538 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 RBM41Q96IZ5 413 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 AP1M1Q9BXS5 423 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 FUT8Q9BYC5 575 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 DDX56Q9NY93 547 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 HMGXB4Q9UGU5 601 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 DMGDHQ9UI17 866 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 RASAL2Q9UJF2 1139 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 TSPAN16Q9UKR8 245 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 PADI3Q9ULW8 664 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 A8MXQ7 604 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 MAP2K7O14733 419 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 PHF2O75151 1096 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 PYGMP11217 842 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 WARSP23381 471 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 GNL1P36915 607 aaPredicted RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 LILRA4P59901 499 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 COPS2P61201 443 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 DSC3Q14574 896 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 TRIM71Q2Q1W2 868 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 TMEM86AQ8N2M4 240 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 WNT8BQ93098 351 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 MCRS1Q96EZ8 462 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 DDX27Q96GQ7 796 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 MCEEQ96PE7 176 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 MRPL45Q9BRJ2 306 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 FAM53CQ9NYF3 392 aa16.24■□□□□ 0.19
SGCE-205ENST00000437425 FEZ2Q9UHY8 353 aaPredicted RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 UTP11Q9Y3A2 253 aaKnown RBP16.24■□□□□ 0.19
SGCE-205ENST00000437425 ARHGEF37A1IGU5 675 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 PODXLO00592 558 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 PTGESO14684 152 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 FSCN2O14926 492 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 RAD51CO43502 376 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 SSTR3P32745 418 aaPredicted RBP16.23■□□□□ 0.19
SGCE-205ENST00000437425 FNTAP49354 379 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 ZNF211Q13398 564 aaPredicted RBP16.23■□□□□ 0.19
SGCE-205ENST00000437425 HADHQ16836 314 aaKnown RBP16.23■□□□□ 0.19
SGCE-205ENST00000437425 LHX8Q68G74 356 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 XYLT1Q86Y38 959 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 RCOR2Q8IZ40 523 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 KRT222Q8N1A0 295 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 C12orf50Q8NA57 414 aaPredicted RBP16.23■□□□□ 0.19
SGCE-205ENST00000437425 UROC1Q96N76 676 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 TSPYL2Q9H2G4 693 aaPredicted RBP16.23■□□□□ 0.19
SGCE-205ENST00000437425 EPB41L5Q9HCM4 733 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 PCYOX1Q9UHG3 505 aa16.23■□□□□ 0.19
SGCE-205ENST00000437425 FAM170AA1A519 330 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 PPEF2O14830 753 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 SEC31AO94979 1220 aaKnown RBP16.22■□□□□ 0.19
SGCE-205ENST00000437425 SCNN1AP37088 669 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 ACADSBP45954 432 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 MARCKSL1P49006 195 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 SLC8A3P57103 927 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 SLC7A5Q01650 507 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 GUCY2DQ02846 1103 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 LPIN1Q14693 890 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 C2CD6Q53TS8 623 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 ODF2Q5BJF6 829 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 ADGRF2Q8IZF7 708 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 AENQ8WTP8 325 aaKnown RBP16.22■□□□□ 0.19
SGCE-205ENST00000437425 HDAC7Q8WUI4 952 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 ZNF296Q8WUU4 475 aaPredicted RBP16.22■□□□□ 0.19
SGCE-205ENST00000437425 CAVIN3Q969G5 261 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 CPXM1Q96SM3 734 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 FAM129AQ9BZQ8 928 aa16.22■□□□□ 0.19
SGCE-205ENST00000437425 DDX47Q9H0S4 455 aaKnown RBP16.22■□□□□ 0.19
SGCE-205ENST00000437425 CXCL16Q9H2A7 254 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms