RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 XKR9Q5GH70 373 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 C1orf228Q6PIY5 440 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 PRR23BQ6ZRT6 265 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 Q6ZUG5 572 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 ZNF438Q7Z4V0 828 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 CEP57Q86XR8 500 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 C1orf127Q8N9H9 656 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 DAGLBQ8NCG7 672 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 BRF1Q92994 677 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 CPB2Q96IY4 423 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 LXNQ9BS40 222 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 SLC26A6Q9BXS9 759 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 ZSWIM4Q9H7M6 989 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 BRD9Q9H8M2 597 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 KCNMB3Q9NPA1 279 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 PARP2Q9UGN5 583 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 VAV3Q9UKW4 847 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 SPEGQ15772 3267 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 SCO2A0A1W2PP80 73 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 SHISA7A6NL88 538 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 PAPSS2O95340 614 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 NPTXRO95502 500 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 THP07101 528 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 RHOP08100 348 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 ACPPP15309 386 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 GCFC2P16383 781 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 PTPN2P17706 415 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 EPHA1P21709 976 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 OR1D2P34982 312 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 EIF1AXP47813 144 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 CXCL12P48061 93 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 SPIRE1Q08AE8 756 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 IL31Q6EBC2 164 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 TANGO2Q6ICL3 276 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 PPP4R3AQ6IN85 833 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 BLIDQ8IZY5 108 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 SPEM1Q8N4L4 309 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 ING5Q8WYH8 240 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 MCRS1Q96EZ8 462 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 NAP1L4Q99733 375 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 TRMT61BQ9BVS5 477 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 PLA2G2FQ9BZM2 168 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 ADAM19Q9H013 955 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 LMAN1LQ9HAT1 526 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 ZFP14Q9HCL3 533 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 XPNPEP1Q9NQW7 623 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 SH2B1Q9NRF2 756 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 HCFC1R1Q9NWW0 138 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 WRAP73Q9P2S5 460 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 NDRG2Q9UN36 371 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 BACE2Q9Y5Z0 518 aa9.27□□□□□ -0.93
NIF3L1-208ENST00000436412 COL4A3Q01955 1670 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ACACAQ13085 2346 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 CACNA1EQ15878 2313 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 AKAP13Q12802 2813 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 GON4LQ3T8J9 2241 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ARHGEF37A1IGU5 675 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 CASTOR2A6NHX0 329 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 TMEM189-UBE2V1I3L0A0 370 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ZNF197O14709 1029 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ADAM12O43184 909 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 TRAPPC3O43617 180 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 PMLP29590 882 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ARL2P36404 184 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 RBM25P49756 843 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 DNM1Q05193 864 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 CAPSQ13938 189 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 LPAL2Q16609 132 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ANKS3Q6ZW76 656 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 LONP2Q86WA8 852 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 HASPINQ8TF76 798 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 DEPDC1BQ8WUY9 529 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 FAM3CQ92520 227 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 RABGGTAQ92696 567 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 MSANTD3Q96H12 275 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 PAAF1Q9BRP4 392 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 AGXT2Q9BYV1 514 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 ZFP64Q9NPA5 681 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 MTRRQ9UBK8 725 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 VWA8A3KMH1 1905 aa9.26□□□□□ -0.93
NIF3L1-208ENST00000436412 NBEAQ8NFP9 2946 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 ITPR1Q14643 2758 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 B4GALT5O43286 388 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 SLC37A4O43826 429 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 MARCH6O60337 910 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 LYPLA2O95372 231 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 DEXIO95424 95 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 LRG1P02750 347 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 RPLP1P05386 114 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 PSMC3P17980 439 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 FCARP24071 287 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 MZF1P28698 734 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 HOXA6P31267 233 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 ELF1P32519 619 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 EVCP57679 992 aa9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 SSRP1Q08945 709 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-208ENST00000436412 LRRC32Q14392 662 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms