RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DUSP12Q9UNI6 340 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 ZDBF2Q9HCK1 2354 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 HLA-DRAP01903 254 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 PDGFRBP09619 1106 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 TRIM49P0CI25 452 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 TRIM49CP0CI26 452 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 LMO2P25791 158 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 CCR2P41597 374 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 RPL10AP62906 217 aaKnown RBP17.38■□□□□ 0.37
SMPD4-207ENST00000435455 TAF12Q16514 161 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 CFAP221Q4G0U5 840 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 FAM171BQ6P995 826 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 DNAJB7Q7Z6W7 309 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-207ENST00000435455 TMC8Q8IU68 726 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 SPATA2LQ8IUW3 424 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-207ENST00000435455 SLC44A3Q8N4M1 653 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 TRIML1Q8N9V2 468 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 OR6B3Q8NGW1 331 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 RSAD2Q8WXG1 361 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 MCRS1Q96EZ8 462 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 EEF2KMTQ96G04 330 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 IPO9Q96P70 1041 aaKnown RBP17.38■□□□□ 0.37
SMPD4-207ENST00000435455 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
SMPD4-207ENST00000435455 PI4K2AQ9BTU6 479 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 LRRC3Q9BY71 257 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 IMPG2Q9BZV3 1241 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 TMEM8AQ9HCN3 771 aa17.38■□□□□ 0.37
SMPD4-207ENST00000435455 MYBPHLA2RUH7 354 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 BIN1O00499 593 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 ASS1P00966 412 aaKnown RBP17.37■□□□□ 0.37
SMPD4-207ENST00000435455 CD44P16070 742 aaKnown RBP17.37■□□□□ 0.37
SMPD4-207ENST00000435455 ATF6P18850 670 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 MAGEA11P43364 429 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 GCLMP48507 274 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 CDR1P51861 262 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 FOXR2Q6PJQ5 311 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 PARM1Q6UWI2 310 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 HFE2Q6ZVN8 426 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 SHKBP1Q8TBC3 707 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 FGF14Q92915 247 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 ASIC4Q96FT7 647 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 CEP63Q96MT8 703 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 LPIN3Q9BQK8 851 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 GPR88Q9GZN0 384 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 KIAA1468Q9P260 1216 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 NUMBLQ9Y6R0 609 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 PTPRDP23468 1912 aa17.37■□□□□ 0.37
SMPD4-207ENST00000435455 BICDL2A1A5D9 508 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 TRIM49BA6NDI0 452 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 PPP1R3GB7ZBB8 358 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 HCRTO43612 131 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 ATP2C2O75185 946 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 MOSPD3O75425 235 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 SRFP11831 508 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 BMP6P22004 513 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 CYP2F1P24903 491 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 PMS1P54277 932 aaKnown RBP17.36■□□□□ 0.37
SMPD4-207ENST00000435455 PSMC1P62191 440 aaKnown RBP17.36■□□□□ 0.37
SMPD4-207ENST00000435455 PPP3CAQ08209 521 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 KRT39Q6A163 491 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 KLHL10Q6JEL2 608 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 SCARA5Q6ZMJ2 495 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 CCDC150Q8NCX0 1101 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 MYCBPAPQ8TBZ2 947 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 PBXIP1Q96AQ6 731 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 GBP4Q96PP9 640 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 SMOC2Q9H3U7 446 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 SLITRK6Q9H5Y7 841 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 SMYD3Q9H7B4 428 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 CRTAC1Q9NQ79 661 aa17.36■□□□□ 0.37
SMPD4-207ENST00000435455 MAGEC2Q9UBF1 373 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-207ENST00000435455 ARMCX3Q9UH62 379 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-207ENST00000435455 A8MXQ7 604 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 ECI2O75521 394 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 CSH1P0DML2 217 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 CSH2P0DML3 217 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 PTPN1P18031 435 aaKnown RBP17.35■□□□□ 0.37
SMPD4-207ENST00000435455 CDC25CP30307 473 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 CAMK4Q16566 473 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 CCDC142Q17RM4 750 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 ARHGAP15Q53QZ3 475 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 MDH1BQ5I0G3 518 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 TCERG1LQ5VWI1 586 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 VSTM1Q6UX27 236 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 GIPC2Q8TF65 315 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 NELFBQ8WX92 580 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 MYLPFQ96A32 169 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 TNIP3Q96KP6 325 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 GCNAQ96QF7 691 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 MMRN2Q9H8L6 949 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 METTL14Q9HCE5 456 aaKnown RBP17.35■□□□□ 0.37
SMPD4-207ENST00000435455 ZNF334Q9HCZ1 680 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-207ENST00000435455 FBXL21Q9UKT6 434 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 DENND4CQ5VZ89 1909 aa17.35■□□□□ 0.37
SMPD4-207ENST00000435455 A0A1W2PRU2 124 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 NARSO43776 548 aaKnown RBP17.34■□□□□ 0.37
SMPD4-207ENST00000435455 GJA1P17302 382 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 GABRR2P28476 465 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 MXI1P50539 228 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 CDH8P55286 799 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms