RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C9orf72Q96LT7 481 aa19.6■□□□□ 0.73
CLK1-205ENST00000434813 MMP19Q99542 508 aa19.6■□□□□ 0.73
CLK1-205ENST00000434813 CCDC77Q9BR77 488 aa19.6■□□□□ 0.73
CLK1-205ENST00000434813 EFCC1Q9HA90 598 aa19.6■□□□□ 0.73
CLK1-205ENST00000434813 RRAGCQ9HB90 399 aa19.6■□□□□ 0.73
CLK1-205ENST00000434813 RBPJLQ9UBG7 517 aa19.6■□□□□ 0.73
CLK1-205ENST00000434813 POLIQ9UNA4 740 aa19.6■□□□□ 0.73
CLK1-205ENST00000434813 LRRD1A4D1F6 860 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 NDC80O14777 642 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 ITGAVP06756 1048 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 GJB1P08034 283 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 CXCL8P10145 99 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 MAGEA4P43358 317 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 ARSEP51690 589 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 RIBC1Q8N443 379 aaPredicted RBP19.59■□□□□ 0.73
CLK1-205ENST00000434813 FNIP1Q8TF40 1166 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 RPF1Q9H9Y2 349 aaKnown RBP19.59■□□□□ 0.73
CLK1-205ENST00000434813 ACTL7BQ9Y614 415 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 LOC102724159A0A0B4J2E5 919 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 SIGLEC16A6NMB1 481 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 VIMP08670 466 aaKnown RBP19.59■□□□□ 0.73
CLK1-205ENST00000434813 CETPP11597 493 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 CREB1P16220 341 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 CLCN3P51790 818 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 OSTNP61366 133 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 SLC25A11Q02978 314 aaKnown RBP19.59■□□□□ 0.73
CLK1-205ENST00000434813 PWP2Q15269 919 aaKnown RBP19.59■□□□□ 0.73
CLK1-205ENST00000434813 TMEM132AQ24JP5 1023 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 ZNF667Q5HYK9 610 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 WDR78Q5VTH9 848 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 EFCAB12Q6NXP0 572 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 TTC25Q96NG3 672 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 GPBP1L1Q9HC44 474 aaPredicted RBP19.59■□□□□ 0.73
CLK1-205ENST00000434813 NXF1Q9UBU9 619 aaKnown RBP19.59■□□□□ 0.73
CLK1-205ENST00000434813 SIX4Q9UIU6 781 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 EFR3BQ9Y2G0 817 aa19.59■□□□□ 0.73
CLK1-205ENST00000434813 C3orf70A6NLC5 250 aaPredicted RBP19.58■□□□□ 0.73
CLK1-205ENST00000434813 DNM1LO00429 736 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 CD19P15391 556 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 PSMA2P25787 234 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 MORF4L2Q15014 288 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 TAX1BP1Q86VP1 789 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 DYDC1Q8WWB3 177 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 ACSF2Q96CM8 615 aaPredicted RBP19.58■□□□□ 0.73
CLK1-205ENST00000434813 ZNF668Q96K58 619 aaPredicted RBP19.58■□□□□ 0.73
CLK1-205ENST00000434813 CFAP57Q96MR6 1250 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 MINDY3Q9H8M7 445 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 PCDH9Q9HC56 1237 aa19.58■□□□□ 0.73
CLK1-205ENST00000434813 PRMT7Q9NVM4 692 aaPredicted RBP19.58■□□□□ 0.73
CLK1-205ENST00000434813 TPX2Q9ULW0 747 aaKnown RBP19.58■□□□□ 0.73
CLK1-205ENST00000434813 MCM3APO60318 1980 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 CCT8L1PA6NM43 557 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 C22orf31O95567 290 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 TXNP10599 105 aaKnown RBP19.58■□□□□ 0.72
CLK1-205ENST00000434813 KRT3P12035 628 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 BRAFP15056 766 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 RFC1P35251 1148 aaPredicted RBP19.58■□□□□ 0.72
CLK1-205ENST00000434813 RAP1GAPP47736 663 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 RAD23BP54727 409 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 GPS1Q13098 491 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 Q3C1V9 767 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 CDR2LQ86X02 465 aaPredicted RBP19.58■□□□□ 0.72
CLK1-205ENST00000434813 SUGP1Q8IWZ8 645 aaKnown RBP19.58■□□□□ 0.72
CLK1-205ENST00000434813 TMEM192Q8IY95 271 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 CYP4X1Q8N118 509 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 C1orf127Q8N9H9 656 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 SLC35B2Q8TB61 432 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 GTF3C2Q8WUA4 911 aaPredicted RBP19.58■□□□□ 0.72
CLK1-205ENST00000434813 COPS5Q92905 334 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 MROH8Q9H579 483 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 WDR35Q9P2L0 1181 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 CYTH4Q9UIA0 394 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 SHOC2Q9UQ13 582 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 NAALADL1Q9UQQ1 740 aa19.58■□□□□ 0.72
CLK1-205ENST00000434813 GOLGA8SH3BPF8 625 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 LRCH4O75427 683 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 OAS1P00973 400 aaKnown RBP19.57■□□□□ 0.72
CLK1-205ENST00000434813 NFICP08651 508 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 KRT19P08727 400 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 KRT7P08729 469 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 ZSCAN5DPP0CG00 497 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 HNRNPH1P31943 449 aaKnown RBP19.57■□□□□ 0.72
CLK1-205ENST00000434813 SCTRP47872 440 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 FKBP1BP68106 108 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 LRRC14Q15048 493 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 FAM187BQ17R55 369 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 CCDC142Q17RM4 750 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 RNASEH2BQ5TBB1 312 aaKnown RBP19.57■□□□□ 0.72
CLK1-205ENST00000434813 CYP4F22Q6NT55 531 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 MGARPQ8TDB4 240 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 FRMD8P1Q9BZ68 369 aaPredicted RBP19.57■□□□□ 0.72
CLK1-205ENST00000434813 SAYSD1Q9NPB0 183 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 NMRK2Q9NPI5 230 aa19.57■□□□□ 0.72
CLK1-205ENST00000434813 PECAM1P16284 738 aaPredicted RBP19.56■□□□□ 0.72
CLK1-205ENST00000434813 PHKA2P46019 1235 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 POU5F1BQ06416 359 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 TTLL4Q14679 1199 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 WDR72Q3MJ13 1102 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 JOSD2Q8TAC2 188 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 CKAP2Q8WWK9 683 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms