RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 BBS12Q6ZW61 710 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 EEPD1Q7L9B9 569 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 TRPM8Q7Z2W7 1104 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ERO1BQ86YB8 467 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ANKRD42Q8N9B4 389 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 SLC35B2Q8TB61 432 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 MGARPQ8TDB4 240 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 TFAP2BQ92481 460 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 C9orf72Q96LT7 481 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 MMP19Q99542 508 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 FAM118BQ9BPY3 351 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ASCC2Q9H1I8 757 aaPredicted RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 CDT1Q9H211 546 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ASB7Q9H672 318 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 KLHL11Q9NVR0 708 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 EURLQ9NYK6 297 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 SLC24A2Q9UI40 661 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 SMG5Q9UPR3 1016 aaKnown RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 LRRC37A2A6NM11 1700 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 ASB14A6NK59 587 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 TCP11X1B4DZS4 312 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 SGK1O00141 431 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 PECAM1P16284 738 aaPredicted RBP10.97□□□□□ -0.65
CD44-210ENST00000434472 TSHRP16473 764 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 PHBP35232 272 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 NF2P35240 595 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 PSMC1P62191 440 aaKnown RBP10.97□□□□□ -0.65
CD44-210ENST00000434472 PLCB3Q01970 1234 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 MBTD1Q05BQ5 628 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 TTLL4Q14679 1199 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 TMED2Q15363 201 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 TAZQ16635 292 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 HSDL1Q3SXM5 330 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 SWT1Q5T5J6 900 aaKnown RBP10.97□□□□□ -0.65
CD44-210ENST00000434472 RNASEH2BQ5TBB1 312 aaKnown RBP10.97□□□□□ -0.65
CD44-210ENST00000434472 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 SPATA21Q7Z572 469 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 CCDC125Q86Z20 511 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
CD44-210ENST00000434472 SULF1Q8IWU6 871 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 MAML1Q92585 1016 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 PWWP2AQ96N64 755 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
CD44-210ENST00000434472 MROH8Q9H579 483 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 SYNCQ9H7C4 482 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 ADARB2Q9NS39 739 aaKnown RBP10.97□□□□□ -0.65
CD44-210ENST00000434472 HAUS2Q9NVX0 235 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 ASNSD1Q9NWL6 643 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 FETUBQ9UGM5 382 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 POLIQ9UNA4 740 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 ARL2BPQ9Y2Y0 163 aa10.97□□□□□ -0.65
CD44-210ENST00000434472 DNAJC25-GNG10A0A024R161 153 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 C3orf70A6NLC5 250 aaPredicted RBP10.96□□□□□ -0.65
CD44-210ENST00000434472 RASA4BC9J798 803 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 GOLGA8SH3BPF8 625 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 MAGEB2O15479 319 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 PRPF4O43172 522 aaKnown RBP eCLIP10.96□□□□□ -0.65
CD44-210ENST00000434472 RASA4O43374 803 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 RNF8O76064 485 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 KRT19P08727 400 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 VDRP11473 427 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 TCF4P15884 667 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 KDELR1P24390 212 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 RFC1P35251 1148 aaPredicted RBP10.96□□□□□ -0.65
CD44-210ENST00000434472 GABRB2P47870 512 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 MNAT1P51948 309 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 RAD23BP54727 409 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 ARL4CP56559 192 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 SLC25A11Q02978 314 aaKnown RBP10.96□□□□□ -0.65
CD44-210ENST00000434472 LRRC14Q15048 493 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 PTPN20Q4JDL3 420 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 CYP4A22Q5TCH4 519 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 WDR78Q5VTH9 848 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 EEF1DP3Q658K8 133 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 NUGGCQ68CJ6 796 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 CYP4F22Q6NT55 531 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 CCDC62Q6P9F0 684 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 XYLT1Q86Y38 959 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 PPIL6Q8IXY8 311 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 SRRM1Q8IYB3 904 aaKnown RBP10.96□□□□□ -0.65
CD44-210ENST00000434472 ANKRD13AQ8IZ07 590 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 SHCBP1Q8NEM2 672 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 NLRP4Q96MN2 994 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 ELP3Q9H9T3 547 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 ERAP1Q9NZ08 941 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 CTNNAL1Q9UBT7 734 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.65
CD44-210ENST00000434472 KIAA1257Q9ULG3 409 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 SLC12A4Q9UP95 1085 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 KCNH4Q9UQ05 1017 aa10.96□□□□□ -0.65
CD44-210ENST00000434472 PTPRFP10586 1907 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SPDYE5A6NIY4 337 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CHUKO15111 745 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 ATP2C2O75185 946 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 STAU1O95793 577 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 HMGCRP04035 888 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 ZSCAN5DPP0CG00 497 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 STAG3L1P0CL83 205 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms