RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CCDC177Q9NQR7 707 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GEMIN8Q9NWZ8 242 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KCNK4Q9NYG8 393 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 AGO2Q9UKV8 859 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 NOL3O60936 208 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CYP11B1P15538 503 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ITGA9Q13797 1035 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 DRAP1Q14919 205 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PTF1AQ7RTS3 328 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 DESI2Q9BSY9 194 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 POLR3FQ9H1D9 316 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 BTBD7Q9P203 1132 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 COMMD10Q9Y6G5 202 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PAPOLAP51003 745 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 STX17P56962 302 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PLOD1Q02809 727 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PRR23CQ6ZRP0 262 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 MCCC1Q96RQ3 725 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RBM15Q96T37 977 aaKnown RBP eCLIP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CENPKQ9BS16 269 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 KANSL3Q9P2N6 904 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PCDHA3Q9Y5H8 950 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PTPRFP10586 1907 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 H3BRJ5 948 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CASQ2O14958 399 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PSMD10O75832 226 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 OATP04181 439 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CTTNQ14247 550 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ASTE1Q2TB18 679 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SV2CQ496J9 727 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 NT5C1AQ9BXI3 368 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SLC2A11Q9BYW1 496 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ZFATQ9P243 1243 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF212Q9UDV6 495 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 VAV3Q9UKW4 847 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RIMBP2O15034 1052 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 BRAFP15056 766 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 UBXN2AP68543 259 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ANKRD20A8PQ5CZ79 823 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RARS2Q5T160 578 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CCDC137Q6PK04 289 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SRLQ86TD4 932 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ERICH1Q86X53 443 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RIOX2Q8IUF8 465 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 COLGALT2Q8IYK4 626 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ALDH16A1Q8IZ83 802 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 IQCKQ8N0W5 287 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 FAM133AQ8N9E0 248 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 LEMD2Q8NC56 503 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CASKIN2Q8WXE0 1202 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SDCCAG3Q96C92 435 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 L3MBTL3Q96JM7 780 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SH3GL1Q99961 368 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 LRCH1Q9Y2L9 728 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CAPN7Q9Y6W3 813 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SPTBN1Q01082 2364 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 IFRD1O00458 451 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RBP1P09455 135 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 LHX1P48742 406 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 BCAR1P56945 870 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 OLFML2BQ68BL8 750 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RFX8Q6ZV50 586 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SLC26A11Q86WA9 606 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SLC22A9Q8IVM8 553 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CPLX3Q8WVH0 158 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 TTC17Q96AE7 1141 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 LRMDAQ9H2I8 198 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RBAKQ9NYW8 714 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SYNDIG1LA6NDD5 238 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 VWA5AO00534 786 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 EGFRP00533 1210 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PURAQ00577 322 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SREBF2Q12772 1141 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 GSTA3Q16772 222 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CREG2Q8IUH2 290 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 STK40Q8N2I9 435 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 IFT81Q8WYA0 676 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 IL17RBQ9NRM6 502 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 TNS1Q9HBL0 1735 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 EML1O00423 815 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 GH1P01241 217 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 HOXD10P28358 340 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PRDX6P30041 224 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 MAGEA8P43361 318 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 INCA1Q0VD86 236 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 COQ5Q5HYK3 327 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SH3D19Q5HYK7 790 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PNPT1Q8TCS8 783 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 BAP1Q92560 729 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 NTAN1Q96AB6 310 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ABCB6Q9NP58 842 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 COMMD8Q9NX08 183 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF70Q9UC06 446 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 RIMKLBQ9ULI2 386 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PRKAB2O43741 272 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 FGF19O95750 216 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 MAPK1P28482 360 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CDH5P33151 784 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms