RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 HIST1H2AHQ96KK5 128 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 HIST1H2AJQ99878 128 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 H2AFJQ9BTM1 129 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 YIPF2Q9BWQ6 316 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DYRK4Q9NR20 520 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 NCF1BA6NI72 391 aaPredicted RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 NCF1CA8MVU1 366 aaPredicted RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 PYGMP11217 842 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 NCF1P14598 390 aaPredicted RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 HSPA13P48723 471 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 NT5C2P49902 561 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 GPAT2Q6NUI2 795 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 MMGT1Q8N4V1 131 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 SH3TC2Q8TF17 1288 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 FOPNLQ96NB1 174 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 PTPN7P35236 360 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 OTUD4Q01804 1114 aaKnown RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 CHSY1Q86X52 802 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 MASTLQ96GX5 879 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 AP4S1Q9Y587 144 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 SNX13Q9Y5W8 968 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 A0A1B0GW55 424 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 PPP1R3GB7ZBB8 358 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 TRIM49D1C9J1S8 452 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 MMP10P09238 476 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DUX4L2P0CJ85 424 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DUX4L3P0CJ86 424 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DUX4L4P0CJ87 422 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DUX4L5P0CJ88 424 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DUX4L6P0CJ89 424 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DUX4L7P0CJ90 424 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 MTMR2Q13614 643 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 FGD2Q7Z6J4 655 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 HNRNPLLQ8WVV9 542 aaKnown RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 FUT8Q9BYC5 575 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 DUX4Q9UBX2 424 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 IRF1P10914 325 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 DDX5P17844 614 aaKnown RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 BRD2P25440 801 aaKnown RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 GTF2H1P32780 548 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 CLEC16AQ2KHT3 1053 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 DENND5BQ6ZUT9 1274 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 RAB42Q8N4Z0 105 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 KCTD10Q9H3F6 313 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 TGM2P21980 687 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 SPP2Q13103 211 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 THUMPD3Q9BV44 507 aaKnown RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 MAPK7Q13164 816 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 OR8H2Q8N162 312 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 ZNF560Q96MR9 790 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 PARNO95453 639 aaKnown RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 CSTF3Q12996 717 aaKnown RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 SGSM1Q2NKQ1 1148 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 FAXCQ5TGI0 409 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 PACSIN1Q9BY11 444 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 PNMA8BQ9ULN7 279 aaPredicted RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 A0A0G2JLW4 131 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 PGK2P07205 417 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 ERVK-24P63145 666 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 AMHR2Q16671 573 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 GOLGA7BQ2TAP0 167 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 ILKAPQ9H0C8 392 aaPredicted RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 NUMBP49757 651 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 POU4F1Q01851 419 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 ALDH6A1Q02252 535 aaKnown RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 SGF29Q96ES7 293 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 TRIM8Q9BZR9 551 aa12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 PABPC3Q9H361 631 aaKnown RBP12.19□□□□□ -0.46
RIMKLA-202ENST00000431473 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 SPAG6O75602 509 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 EFNA5P52803 228 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 C12orf60Q5U649 245 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 PTRHD1Q6GMV3 140 aaKnown RBP12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 TTLL6Q8N841 843 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 SIKE1Q9BRV8 207 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 RSAD1Q9HA92 442 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 MYH11P35749 1972 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 PSMD3O43242 534 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 CENPCQ03188 943 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 COL23A1Q86Y22 540 aaPredicted RBP12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 FAM136AQ96C01 138 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 TMEM8AQ9HCN3 771 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 TOMM70O94826 608 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 ATP6V1G2O95670 118 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 ASMTLO95671 621 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 CLPTM1O96005 669 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 GLRBP48167 497 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 ZRANB3Q5FWF4 1079 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 CLEC4GQ6UXB4 293 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 NLRP9Q7RTR0 991 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 ACAD9Q9H845 621 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 SENP2Q9HC62 589 aa12.18□□□□□ -0.46
RIMKLA-202ENST00000431473 MAP3K20Q9NYL2 800 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms