RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 SH3BP4Q9P0V3 963 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 DKK3Q9UBP4 350 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 ZNF70Q9UC06 446 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-204ENST00000431283 TNKSO95271 1327 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 AOX1Q06278 1338 aa5.99□□□□□ -1.45
PTPN4-204ENST00000431283 JTBO76095 146 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 IL33O95760 270 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 HK3P52790 923 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 EVA1CP58658 441 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 AMPD3Q01432 767 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 SATB1Q01826 763 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 FAM160B1Q5W0V3 765 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 TMEM108Q6UXF1 575 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 VGLL2Q8N8G2 317 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 ZNF778Q96MU6 729 aa5.98□□□□□ -1.45
PTPN4-204ENST00000431283 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.98□□□□□ -1.45
PTPN4-204ENST00000431283 TDRD9Q8NDG6 1382 aaKnown RBP5.97□□□□□ -1.45
PTPN4-204ENST00000431283 WIPF3A6NGB9 483 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 PPM1DO15297 605 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 TLR5O60602 858 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 AMOTQ4VCS5 1084 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 MTX3Q5HYI7 312 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 VPS53Q5VIR6 699 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 ICE2Q659A1 982 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 ANKRD16Q6P6B7 361 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 USP45Q70EL2 814 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 PCSK9Q8NBP7 692 aaKnown RBP5.97□□□□□ -1.45
PTPN4-204ENST00000431283 FAM46DQ8NEK8 389 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 BRIX1Q8TDN6 353 aaKnown RBP5.97□□□□□ -1.45
PTPN4-204ENST00000431283 TBC1D5Q92609 795 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 C1QTNF7Q9BXJ2 289 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 SEMA4CQ9C0C4 833 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 MRPL46Q9H2W6 279 aaKnown RBP5.97□□□□□ -1.45
PTPN4-204ENST00000431283 MRPS18AQ9NVS2 196 aaKnown RBP5.97□□□□□ -1.45
PTPN4-204ENST00000431283 AGAP1Q9UPQ3 857 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 SOGA1O94964 1423 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 DNMBPQ6XZF7 1577 aa5.97□□□□□ -1.45
PTPN4-204ENST00000431283 PRSS29PA6NIE9 313 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 H3BUI4 141 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 CERS1P27544 350 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 KCNJ5P48544 419 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 TCF15Q12870 199 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 MTFMTQ96DP5 389 aaKnown RBP5.96□□□□□ -1.46
PTPN4-204ENST00000431283 MOGAT1Q96PD6 335 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 TTYH3Q9C0H2 523 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 PNPOQ9NVS9 261 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 PCDHA1Q9Y5I3 950 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 ZNF804BA4D1E1 1349 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 WASHC2CQ9Y4E1 1318 aa5.96□□□□□ -1.46
PTPN4-204ENST00000431283 POLR2AP24928 1970 aaKnown RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 SMIM22K7EJ46 135 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 SLC16A3O15427 465 aaKnown RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 EIF4G3O43432 1585 aaKnown RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 ZRANB2O95218 330 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 ONECUT2O95948 504 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 ATXN1LP0C7T5 689 aaKnown RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 PRR35P0CG20 571 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 TYRP14679 529 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 KELP23276 732 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 PDE1AP54750 535 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 EEFSECP57772 596 aaKnown RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 PGS1Q32NB8 556 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 LONRF3Q496Y0 759 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 AARS2Q5JTZ9 985 aaKnown RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 WDR53Q7Z5U6 358 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 PPP1R32Q7Z5V6 425 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 SLC46A1Q96NT5 459 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 CCNL1Q9UK58 526 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 ARHGEF17Q96PE2 2063 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 POLA1P09884 1462 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-204ENST00000431283 ARAP1Q96P48 1450 aa5.95□□□□□ -1.46
PTPN4-204ENST00000431283 AHSGP02765 367 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 PDHA1P08559 390 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 PIM1P11309 404 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-204ENST00000431283 CYP2C18P33260 490 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 PXNP49023 591 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-204ENST00000431283 MAP2K6P52564 334 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 LOXL3P58215 753 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 IQCB1Q15051 598 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 SLC44A4Q53GD3 710 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 PCID2Q5JVF3 399 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 TREML2Q5T2D2 321 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 ZNF782Q6ZMW2 699 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-204ENST00000431283 C1QL2Q7Z5L3 287 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 DTX2Q86UW9 622 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 ZBTB46Q86UZ6 589 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 FAM109AQ8N4B1 249 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 LRRC71Q8N4P6 559 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 ZCRB1Q8TBF4 217 aaKnown RBP5.94□□□□□ -1.46
PTPN4-204ENST00000431283 HSPBAP1Q96EW2 488 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 ASPSCR1Q9BZE9 553 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 SARS2Q9NP81 518 aaKnown RBP5.94□□□□□ -1.46
PTPN4-204ENST00000431283 CNNM1Q9NRU3 951 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 LUC7L2Q9Y383 392 aaKnown RBP5.94□□□□□ -1.46
PTPN4-204ENST00000431283 COL3A1P02461 1466 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-204ENST00000431283 RAD54L2Q9Y4B4 1467 aa5.94□□□□□ -1.46
PTPN4-204ENST00000431283 POU2F2P09086 479 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 VCAM1P19320 739 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 CLCN2P51788 898 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 TFF2Q03403 129 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms