RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TWNKQ96RR1 684 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 CDCA3Q99618 268 aaPredicted RBP11.71□□□□□ -0.53
CHD4-202ENST00000430771 GPR88Q9GZN0 384 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 ELOVL4Q9GZR5 314 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 DPEP3Q9H4B8 488 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 NSUN3Q9H649 340 aaKnown RBP11.71□□□□□ -0.53
CHD4-202ENST00000430771 MAFFQ9ULX9 164 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 CAPN11Q9UMQ6 739 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 LUC7L2Q9Y383 392 aaKnown RBP11.71□□□□□ -0.53
CHD4-202ENST00000430771 NME7Q9Y5B8 376 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 PLXNA3P51805 1871 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 WDR27A2RRH5 827 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 HIDE1A8MVS5 230 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 MED7O43513 233 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 HCRTO43612 131 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 MFAP3LO75121 409 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 C1RP00736 705 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 CNPP09543 421 aaKnown RBP11.7□□□□□ -0.54
CHD4-202ENST00000430771 OR4Q2P0C623 313 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 SRGAP2BP0DMP2 458 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 VDRP11473 427 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 PTPN1P18031 435 aaKnown RBP11.7□□□□□ -0.54
CHD4-202ENST00000430771 RPL17P18621 184 aaKnown RBP11.7□□□□□ -0.54
CHD4-202ENST00000430771 KLRC2P26717 231 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 CASP14P31944 242 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 OR1D2P34982 312 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 GPR17Q13304 367 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 ORC1Q13415 861 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 RAB33AQ14088 237 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 GRIN2CQ14957 1233 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 ASIC2Q16515 512 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 SLC39A12Q504Y0 691 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 SFMBT2Q5VUG0 894 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 GLYCTKQ8IVS8 523 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 CRYBG2Q8N1P7 616 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 SLC4A11Q8NBS3 891 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 MYCBPAPQ8TBZ2 947 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 SPPL2BQ8TCT7 592 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 BAP1Q92560 729 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 FUBP3Q96I24 572 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHD4-202ENST00000430771 KLHL5Q96PQ7 755 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 CLSTN3Q9BQT9 956 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 ABCB6Q9NP58 842 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 CRTAC1Q9NQ79 661 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 AFF4Q9UHB7 1163 aaKnown RBP11.7□□□□□ -0.54
CHD4-202ENST00000430771 DPP7Q9UHL4 492 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 KIAA1257Q9ULG3 409 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 PCDHB5Q9Y5E4 795 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 PATJQ8NI35 1801 aa11.7□□□□□ -0.54
CHD4-202ENST00000430771 MTMR11A4FU01 709 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 AKR1B15C9JRZ8 316 aaPredicted RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 RFXAPO00287 272 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 FOXN3O00409 490 aaPredicted RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 CYP26A1O43174 497 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 THAP12O43422 761 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 GFPT2O94808 682 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 PNMA6AP0CW24 399 aaPredicted RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 ELF1P32519 619 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 KRT9P35527 623 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 CYP27A1Q02318 531 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 PLD1Q13393 1074 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 MEA1Q16626 185 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 DUSP6Q16828 381 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 CFAP221Q4G0U5 840 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 LIN9Q5TKA1 542 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 ARHGAP17Q68EM7 881 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 FAM171BQ6P995 826 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 FAM35AQ86V20 835 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 ZNF677Q86XU0 584 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 ZNF461Q8TAF7 563 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 SYN2Q92777 582 aaPredicted RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 HEXIM2Q96MH2 286 aaKnown RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 TMEM209Q96SK2 561 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 PKMYT1Q99640 499 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 MED10Q9BTT4 135 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 TLE6Q9H808 572 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 FAM49BQ9NUQ9 324 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 ZNHIT6Q9NWK9 470 aaKnown RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 ABI2Q9NYB9 513 aaPredicted RBP11.69□□□□□ -0.54
CHD4-202ENST00000430771 HSFX1Q9UBD0 423 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 HESX1Q9UBX0 185 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 FBXW11Q9UKB1 542 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 CEP83Q9Y592 693 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
CHD4-202ENST00000430771 MYBPHLA2RUH7 354 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 TRIM66O15016 1216 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 ADAM12O43184 909 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 ATP2C2O75185 946 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 FAM200BP0CF97 657 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 CCDC130P13994 396 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 CYP11B1P15538 503 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
CHD4-202ENST00000430771 ADORA2BP29275 332 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms