RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 GIPC2Q8TF65 315 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 SLC46A2Q9BY10 475 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.16
MSH5-208ENST00000429846 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.16
MSH5-208ENST00000429846 GDAP2Q9NXN4 497 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 USP18Q9UMW8 372 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 AGAP1Q9UPQ3 857 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 DNAH14Q0VDD8 3507 aa16.02■□□□□ 0.15
MSH5-208ENST00000429846 MED19A0JLT2 244 aaPredicted RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 K7ESF4 209 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 F11P03951 625 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 RETP07949 1114 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 TMEM191BP0C7N4 346 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 HMGA1P17096 107 aaKnown RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 WNT7BP56706 349 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 BFSP1Q12934 665 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 PON2Q15165 354 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 INTS6LQ5JSJ4 861 aaKnown RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 Q6ZS52 159 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 TMEM150AQ86TG1 271 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 LONP2Q86WA8 852 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 GPIHBP1Q8IV16 184 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 CCDC65Q8IXS2 484 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 TOP6BLQ8N6T0 577 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 CXorf38Q8TB03 319 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 MRPS31Q92665 395 aaKnown RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 TRMT2BQ96GJ1 504 aaKnown RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 LRRC27Q9C0I9 530 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 TDP1Q9NUW8 608 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 TMLHEQ9NVH6 421 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 DDX43Q9NXZ2 648 aaKnown RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 CDV3Q9UKY7 258 aaKnown RBP16.01■□□□□ 0.15
MSH5-208ENST00000429846 L1RE1Q9UN81 338 aa16.01■□□□□ 0.15
MSH5-208ENST00000429846 PRPF40AO75400 957 aaKnown RBP16■□□□□ 0.15
MSH5-208ENST00000429846 TGM1P22735 817 aa16■□□□□ 0.15
MSH5-208ENST00000429846 PCSK1P29120 753 aa16■□□□□ 0.15
MSH5-208ENST00000429846 LHX1P48742 406 aa16■□□□□ 0.15
MSH5-208ENST00000429846 RBP5P82980 135 aa16■□□□□ 0.15
MSH5-208ENST00000429846 AMPD2Q01433 879 aa16■□□□□ 0.15
MSH5-208ENST00000429846 TNK2Q07912 1038 aa16■□□□□ 0.15
MSH5-208ENST00000429846 SIM2Q14190 667 aaPredicted RBP16■□□□□ 0.15
MSH5-208ENST00000429846 ZNF268Q14587 947 aaPredicted RBP16■□□□□ 0.15
MSH5-208ENST00000429846 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
MSH5-208ENST00000429846 WDR44Q5JSH3 913 aa16■□□□□ 0.15
MSH5-208ENST00000429846 FAM173BQ6P4H8 233 aa16■□□□□ 0.15
MSH5-208ENST00000429846 PRR23BQ6ZRT6 265 aa16■□□□□ 0.15
MSH5-208ENST00000429846 GPD1LQ8N335 351 aa16■□□□□ 0.15
MSH5-208ENST00000429846 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
MSH5-208ENST00000429846 MAB21L3Q8N8X9 362 aa16■□□□□ 0.15
MSH5-208ENST00000429846 TTC8Q8TAM2 541 aa16■□□□□ 0.15
MSH5-208ENST00000429846 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
MSH5-208ENST00000429846 USP28Q96RU2 1077 aa16■□□□□ 0.15
MSH5-208ENST00000429846 FAM83CQ9BQN1 747 aa16■□□□□ 0.15
MSH5-208ENST00000429846 CBWD1Q9BRT8 395 aa16■□□□□ 0.15
MSH5-208ENST00000429846 PI4K2AQ9BTU6 479 aa16■□□□□ 0.15
MSH5-208ENST00000429846 TNMDQ9H2S6 317 aa16■□□□□ 0.15
MSH5-208ENST00000429846 R3HCC1Q9Y3T6 440 aaKnown RBP16■□□□□ 0.15
MSH5-208ENST00000429846 RALGAPA1Q6GYQ0 2036 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 NOL4O94818 638 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 KRT19P08727 400 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 NASPP49321 788 aaPredicted RBP15.99■□□□□ 0.15
MSH5-208ENST00000429846 CDR1P51861 262 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 MYO1EQ12965 1108 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 RUNX3Q13761 415 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 SURF1Q15526 300 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 DPH6Q7L8W6 267 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 MON1AQ86VX9 555 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 ADGRF2Q8IZF7 708 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 ZSWIM2Q8NEG5 633 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 USP13Q92995 863 aaPredicted RBP15.99■□□□□ 0.15
MSH5-208ENST00000429846 EXOC4Q96A65 974 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 ANKRD36BP1Q96IX9 119 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 MYRFLQ96LU7 910 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 PKMYT1Q99640 499 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 RTKNQ9BST9 563 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 MTMR12Q9C0I1 747 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 SMG9Q9H0W8 520 aaKnown RBP15.99■□□□□ 0.15
MSH5-208ENST00000429846 CUEDC2Q9H467 287 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 PDE11AQ9HCR9 933 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 GKN1Q9NS71 199 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
MSH5-208ENST00000429846 MTMR6Q9Y217 621 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 SNX9Q9Y5X1 595 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 NCOR2Q9Y618 2525 aa15.99■□□□□ 0.15
MSH5-208ENST00000429846 HELZP42694 1942 aaKnown RBP15.98■□□□□ 0.15
MSH5-208ENST00000429846 GREB1Q4ZG55 1949 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 ANAPC1Q9H1A4 1944 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 A0A087X0B3 334 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 GOLGA8IPA6NC78 632 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 GOLGA8JA6NMD2 632 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 CHURC1-FNTBB4DL54 471 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 TULP1O00294 542 aaPredicted RBP15.98■□□□□ 0.15
MSH5-208ENST00000429846 GABRDO14764 452 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 FOXD2O60548 495 aaPredicted RBP15.98■□□□□ 0.15
MSH5-208ENST00000429846 FNTBP49356 437 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 GRSF1Q12849 480 aaKnown RBP eCLIP15.98■□□□□ 0.15
MSH5-208ENST00000429846 PDGFRLQ15198 375 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms