RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 TDRD10Q5VZ19 366 aaKnown RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 TRIM50Q86XT4 487 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 PPM1NQ8N819 430 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 FAM71DQ8N9W8 422 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 P3H4Q92791 437 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 STMN2Q93045 179 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 ZNF317Q96PQ6 595 aaPredicted RBP8.48□□□□□ -1.05
HPS4-205ENST00000429411 RABL2BQ9UNT1 228 aa8.48□□□□□ -1.05
HPS4-205ENST00000429411 A0A1W2PPM1 405 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 E2F8A0AVK6 867 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 CDH8P55286 799 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 LMNB2Q03252 620 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 MPP2Q14168 576 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 KRT81Q14533 505 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 EFTUD2Q15029 972 aaKnown RBP eCLIP8.47□□□□□ -1.05
HPS4-205ENST00000429411 OR6B2Q6IFH4 312 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 MAP4K3Q8IVH8 894 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 PDIK1LQ8N165 341 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 FITM2Q8N6M3 262 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 C7orf31Q8N865 590 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 ZNF606Q8WXB4 792 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 ZBTB10Q96DT7 871 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 POM121Q96HA1 1249 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 RBM41Q96IZ5 413 aaKnown RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 IP6K2Q9UHH9 426 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 ZFP69BQ9UJL9 534 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 MROH7Q68CQ1 1323 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 FSCN2O14926 492 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 BAG2O95816 211 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 CETPP11597 493 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 PHBP35232 272 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 RPA3P35244 121 aaPredicted RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 TNFSF9P41273 254 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 SLC1A1P43005 524 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 IREB2P48200 963 aaKnown RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 RGS7P49802 495 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 DRG2P55039 364 aaKnown RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 CNTN2Q02246 1040 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 TFDP1Q14186 410 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 ITIH4Q14624 930 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 ZC3H12AQ5D1E8 599 aaKnown RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 APOBEC3FQ8IUX4 373 aaKnown RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 SPDL1Q96EA4 605 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 L3MBTL3Q96JM7 780 aaPredicted RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 RAB3IPQ96QF0 476 aaPredicted RBP8.47□□□□□ -1.05
HPS4-205ENST00000429411 NUDCD1Q96RS6 583 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 CYTH2Q99418 400 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 YIPF3Q9GZM5 350 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 LRRC19Q9H756 370 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
HPS4-205ENST00000429411 CFAP73A6NFT4 308 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 DHX15O43143 795 aaKnown RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 EXTL3O43909 919 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 TNNC2P02585 160 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 KRT3P12035 628 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 ABCD1P33897 745 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 CTCFP49711 727 aaPredicted RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 GPC3P51654 580 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 NCALDP61601 193 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 TXNRD3NBQ6F5E7 133 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 CCDC62Q6P9F0 684 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 LONP2Q86WA8 852 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 GBP7Q8N8V2 638 aaPredicted RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 HIPK4Q8NE63 616 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 UBA3Q8TBC4 463 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 ACTL9Q8TC94 416 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 HEXIM2Q96MH2 286 aaKnown RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 MAF1Q9H063 256 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 ADAM7Q9H2U9 754 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 ANKEF1Q9NU02 776 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 TXLNGQ9NUQ3 528 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 hCG_2014768A0A024R1R8 64 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 MCF2LO15068 1137 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 GJB1P08034 283 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 HSPA1AP0DMV8 641 aaKnown RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 HSPA1BP0DMV9 641 aaKnown RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 ADRA1DP25100 572 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 LBX1P52954 281 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 OTUD4Q01804 1114 aaKnown RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 CAV1Q03135 178 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 MAMLD1Q13495 774 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 ZNF568Q3ZCX4 644 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 SPDYE2Q495Y8 402 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 VSTM1Q6UX27 236 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 C3orf20Q8ND61 904 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 RSPH1Q8WYR4 309 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 ZNF516Q92618 1163 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 APOL6Q9BWW8 343 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 MYLK2Q9H1R3 596 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 METTL5Q9NRN9 209 aaKnown RBP8.46□□□□□ -1.05
HPS4-205ENST00000429411 UBIAD1Q9Y5Z9 338 aa8.46□□□□□ -1.05
HPS4-205ENST00000429411 EPHB2P29323 1055 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 ARL4CP56559 192 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 GAD2Q05329 585 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 XKR3Q5GH77 459 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 FAM102AQ5T9C2 384 aaPredicted RBP8.46□□□□□ -1.06
HPS4-205ENST00000429411 ENOSF1Q7L5Y1 443 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 SAPCD2Q86UD0 394 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms