RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 MMS22LQ6ZRQ5 1243 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 PAQR9Q6ZVX9 377 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 MCOLN2Q8IZK6 566 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 TMEM199Q8N511 208 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 ZNF653Q96CK0 615 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 DDX27Q96GQ7 796 aaKnown RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 SUSD3Q96L08 255 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 HEXIM2Q96MH2 286 aaKnown RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 UROC1Q96N76 676 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 RHOBTB2Q9BYZ6 727 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 SNX25Q9H3E2 840 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 CRTAC1Q9NQ79 661 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 TMLHEQ9NVH6 421 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 DDX43Q9NXZ2 648 aaKnown RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 MYO1AQ9UBC5 1043 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 DNAI1Q9UI46 699 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 TSPAN16Q9UKR8 245 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 STXBP5LQ9Y2K9 1186 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 DOCK6Q96HP0 2047 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 ABHD14A-ACY1A0A1B0GW23 586 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 MYBPHLA2RUH7 354 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 GRID2IPA4D2P6 1211 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 ANKRD62A6NC57 917 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 TMEM189-UBE2V1I3L0A0 370 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 PIK3R2O00459 728 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 CLDN5O00501 218 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 NCK2O43639 380 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 KRT86O43790 486 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 GABBR2O75899 941 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 GALTP07902 379 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 ODC1P11926 461 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 CAPN2P17655 700 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 RRM1P23921 792 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 CDH5P33151 784 aaPredicted RBP9.42□□□□□ -0.9
SMC6-204ENST00000428868 PKDCCQ504Y2 493 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 MDH1BQ5I0G3 518 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 TMEM240Q5SV17 173 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 C10orf76Q5T2E6 689 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 CYP4A22Q5TCH4 519 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 DCLRE1AQ6PJP8 1040 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 ZNF365Q70YC5 407 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 TAS1R1Q7RTX1 841 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 UNC93AQ86WB7 457 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 CRYBG2Q8N1P7 616 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 LRRC43Q8N309 656 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 OR10T2Q8NGX3 314 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 SECISBP2LQ93073 1101 aaKnown RBP9.42□□□□□ -0.9
SMC6-204ENST00000428868 TOP1MTQ969P6 601 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 ZNF689Q96CS4 500 aaPredicted RBP9.42□□□□□ -0.9
SMC6-204ENST00000428868 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 FAM193BQ96PV7 902 aaPredicted RBP9.42□□□□□ -0.9
SMC6-204ENST00000428868 SYT15Q9BQS2 421 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.94e-19■□□□□ 9.3
SMC6-204ENST00000428868 VN1R3Q9BXE9 311 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 B3GNT5Q9BYG0 378 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 GPR62Q9BZJ7 368 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 TSGA10Q9BZW7 698 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 TRIM7Q9C029 511 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 KANSL3Q9P2N6 904 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 INTUQ9ULD6 942 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 HYOU1Q9Y4L1 999 aa9.42□□□□□ -0.9
SMC6-204ENST00000428868 TCRBV5S1A1TA0A578 114 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 BTNL10A8MVZ5 291 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 ENC1O14682 589 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 HOXA2O43364 376 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 KIF5CO60282 957 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 PALMO75781 387 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 BEST1O76090 585 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 FTCDO95954 541 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 AMHP03971 560 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 ERBB2P04626 1255 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 ATP1A1P05023 1023 aaKnown RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 CYP11A1P05108 521 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 CYP1A2P05177 515 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 OR4Q2P0C623 313 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 PTPN1P18031 435 aaKnown RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 GPD2P43304 727 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 NSFP46459 744 aaKnown RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 RGS7P49802 495 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 CACNA2D1P54289 1103 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 GPC5P78333 572 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 FPGSQ05932 587 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 CNGA2Q16280 664 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 ARHGAP17Q68EM7 881 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 LCLAT1Q6UWP7 414 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 TRIM72Q6ZMU5 477 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 LRRTM3Q86VH5 581 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 PHF13Q86YI8 300 aaPredicted RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 FUKQ8N0W3 1084 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 TMEM86AQ8N2M4 240 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 TTC39CQ8N584 583 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 LRRC57Q8N9N7 239 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 B3GALNT2Q8NCR0 500 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms