RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ADALQ6DHV7 355 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 DCP1BQ8IZD4 617 aaKnown RBP19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 STKLD1Q8NE28 680 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 MRPS31Q92665 395 aaKnown RBP19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 CALML4Q96GE6 196 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 ASB7Q9H672 318 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 KIF9Q9HAQ2 790 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 DPP3Q9NY33 737 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 MAGED2Q9UNF1 606 aaPredicted RBP19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 C2CD2Q9Y426 696 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 PCDHB5Q9Y5E4 795 aa19.76■□□□□ 0.75
UPK3BP1-201ENST00000428678 ANKRD63C9JTQ0 380 aa19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 TBCAO75347 108 aaKnown RBP19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 F11P03951 625 aa19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 HMGA1P17096 107 aaKnown RBP19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 ARL6IP4Q66PJ3 421 aaKnown RBP19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 CAMKK1Q8N5S9 505 aa19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 TTC16Q8NEE8 873 aa19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 RIN3Q8TB24 985 aa19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 ZC3H10Q96K80 434 aaKnown RBP19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 FBRSL1Q9HCM7 1045 aaKnown RBP19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 VPS45Q9NRW7 570 aa19.75■□□□□ 0.75
UPK3BP1-201ENST00000428678 TISP43B9A030 160 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 TULP1O00294 542 aaPredicted RBP19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 ZZEF1O43149 2961 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 PRPF40AO75400 957 aaKnown RBP19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 DRD1P21728 446 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 UBA7P41226 1012 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 GPR15P49685 360 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 GALK1P51570 392 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 SHC2P98077 582 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 TSPY1Q01534 308 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 MCM6Q14566 821 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 PDGFRLQ15198 375 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 ELF2Q15723 593 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 SV2CQ496J9 727 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 PLK5Q496M5 336 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 RNF43Q68DV7 783 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 NAIF1Q69YI7 327 aaPredicted RBP19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 TCEAL6Q6IPX3 200 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 RASSF8Q8NHQ8 419 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 LRRC15Q8TF66 581 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 TCEAL3Q969E4 200 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 EXOC4Q96A65 974 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 AK8Q96MA6 479 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 P2RY13Q9BPV8 354 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 PI4K2AQ9BTU6 479 aa19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 AGO2Q9UKV8 859 aaKnown RBP19.74■□□□□ 0.75
UPK3BP1-201ENST00000428678 KPNA7A9QM74 516 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 SLC26A4O43511 780 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 KCNK5O95279 499 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 CSH1P0DML2 217 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 CSH2P0DML3 217 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 ABCD1P33897 745 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 GTF2BQ00403 316 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 ZC2HC1CQ53FD0 456 aaPredicted RBP19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 SDHAF4Q5VUM1 108 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 MON1AQ86VX9 555 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 CPA6Q8N4T0 437 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 RPLP0P6Q8NHW5 317 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 LSM14BQ9BX40 385 aaKnown RBP19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 CCSER1Q9C0I3 900 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 DUSP15Q9H1R2 295 aaPredicted RBP19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 TMLHEQ9NVH6 421 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 ZFYVE26Q68DK2 2539 aa19.73■□□□□ 0.75
UPK3BP1-201ENST00000428678 PLCG1P19174 1290 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 GJA4P35212 333 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 ATRXP46100 2492 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 CREB5Q02930 508 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 MTF1Q14872 753 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 FBXO43Q4G163 708 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 SLFN12LQ6IEE8 588 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 PSAPL1Q6NUJ1 521 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 EFCAB13Q8IY85 973 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 ZNF560Q96MR9 790 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 FIZ1Q96SL8 496 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 EDEM2Q9BV94 578 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 TRPC7Q9HCX4 862 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 BLOC1S4Q9NUP1 217 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 ABCA7Q8IZY2 2146 aa19.72■□□□□ 0.75
UPK3BP1-201ENST00000428678 H3BQV1 296 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 DCLK1O15075 740 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 RHOBTB1O94844 696 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 APBB3O95704 486 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 PSMD2Q13200 908 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 ZNF268Q14587 947 aaPredicted RBP19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 KARSQ15046 597 aaKnown RBP19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 NFE2Q16621 373 aaPredicted RBP19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 DDR2Q16832 855 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 POMGNT1Q8WZA1 660 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 RAD54LQ92698 747 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 ACDQ96AP0 544 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 KIF2CQ99661 725 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 IKZF4Q9H2S9 585 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 ECT2Q9H8V3 914 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 DUS2Q9NX74 493 aaKnown RBP19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 PPP4R2Q9NY27 417 aa19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 UXTQ9UBK9 157 aaPredicted RBP19.71■□□□□ 0.75
UPK3BP1-201ENST00000428678 SOBPA7XYQ1 873 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 CKMP06732 381 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms