RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TFAP2BQ92481 460 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 TIFAQ96CG3 184 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 TRIM44Q96DX7 344 aaPredicted RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CCDC42Q96M95 316 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 SAMD11Q96NU1 681 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 AGPAT1Q99943 283 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 RTP3Q9BQQ7 232 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 MED10Q9BTT4 135 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 HAUS4Q9H6D7 363 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CERS4Q9HA82 394 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 ALG13Q9NP73 1137 aaKnown RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 MRPL17Q9NRX2 175 aaKnown RBP8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 ARHGAP20Q9P2F6 1191 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 HESX1Q9UBX0 185 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 CEP83Q9Y592 693 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 SZT2Q5T011 3432 aa8.41□□□□□ -1.06
HMGA1P4-201ENST00000428643 ATP8B3O60423 1300 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 MYBPHLA2RUH7 354 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 C5orf67F2Z3F1 127 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 O00370 1275 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 LPXNO60711 386 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 IPO7O95373 1038 aaKnown RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 EFEMP2O95967 443 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 RB1P06400 928 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 MMEP08473 750 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 RPL17P18621 184 aaKnown RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TNFAIP3P21580 790 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 FECHP22830 423 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ANXA13P27216 316 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 CYLC1P35663 651 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 KIF11P52732 1056 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ERVK-21P61565 698 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 SMAD3P84022 425 aaKnown RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 UBE3AQ05086 875 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 GPM6BQ13491 265 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 BMS1Q14692 1282 aaKnown RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 MAPRE1Q15691 268 aaKnown RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 SLC39A12Q504Y0 691 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 PLPP4Q5VZY2 271 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 DENND1BQ6P3S1 775 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TRIM72Q6ZMU5 477 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZNF571Q7Z3V5 609 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TMC7Q7Z402 723 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZNF677Q86XU0 584 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 SPATA2LQ8IUW3 424 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 DCP1BQ8IZD4 617 aaKnown RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 CRYBG2Q8N1P7 616 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 MYCBPAPQ8TBZ2 947 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZNF606Q8WXB4 792 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 MYLPFQ96A32 169 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TMEM209Q96SK2 561 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 CHP1Q99653 195 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TCF25Q9BQ70 676 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZSWIM1Q9BR11 485 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ACBD6Q9BR61 282 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 OXCT2Q9BYC2 517 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZCWPW1Q9H0M4 648 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZBP1Q9H171 429 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 NHEJ1Q9H9Q4 299 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 CRTAC1Q9NQ79 661 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TLR9Q9NR96 1032 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 CHST7Q9NS84 486 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 KRT82Q9NSB4 513 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 SPTLC3Q9NUV7 552 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 MTRRQ9UBK8 725 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 GTF3C4Q9UKN8 822 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TSPAN16Q9UKR8 245 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 KIAA1257Q9ULG3 409 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 LZTS1Q9Y250 596 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 BACE2Q9Y5Z0 518 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 CDY1Q9Y6F8 540 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 PTPRSQ13332 1948 aa8.4□□□□□ -1.06
HMGA1P4-201ENST00000428643 TDRD15B5MCY1 1934 aaKnown RBP8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 FNDC1Q4ZHG4 1894 aaPredicted RBP8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 A0A1W2PPC1 479 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 SSU72P8A0A1W2PR75 194 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 CLDN5O00501 218 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 DDX3XO00571 662 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 GRM6O15303 877 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 ARHGAP6O43182 974 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 MICAL2O94851 1124 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 LSM8O95777 96 aaKnown RBP8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 FAM200BP0CF97 657 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 CTSAP10619 480 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 CHRNB2P17787 502 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 NDUFV1P49821 464 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 SLC8A3P57103 927 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 CCZ1BP86790 482 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 CCZ1P86791 482 aaPredicted RBP8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 FMO1Q01740 532 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 MRPL58Q14197 206 aaKnown RBP8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 SMC1AQ14683 1233 aaKnown RBP8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 MTF1Q14872 753 aa8.39□□□□□ -1.07
HMGA1P4-201ENST00000428643 STILQ15468 1287 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms