RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 KIF9Q9HAQ2 790 aa8.85□□□□□ -0.99
ITSN1-216ENST00000428240 EVLQ9UI08 416 aaPredicted RBP8.85□□□□□ -0.99
ITSN1-216ENST00000428240 MBD1Q9UIS9 605 aaPredicted RBP8.85□□□□□ -0.99
ITSN1-216ENST00000428240 WNT6Q9Y6F9 365 aa8.85□□□□□ -0.99
ITSN1-216ENST00000428240 ATXN2Q99700 1313 aaKnown RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 FAM221BA6H8Z2 402 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 PP2D1A8MPX8 630 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 K7EQS6 105 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 CYP11A1P05108 521 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 CLTAP09496 248 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 MAPTP10636 758 aaKnown RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 HAPLN1P10915 354 aaPredicted RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 HNRNPLP14866 589 aaKnown RBP eCLIP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 DDX6P26196 483 aaKnown RBP eCLIP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 MATR3P43243 847 aaKnown RBP eCLIP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 GUCY1B3Q02153 619 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 PPP2R3AQ06190 1150 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 RAD51AP2Q09MP3 1159 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 LMAN2Q12907 356 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 STRN3Q13033 797 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 NBR1Q14596 966 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 ZNF77Q15935 545 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 ENOX2Q16206 610 aaKnown RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 ME3Q16798 604 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 COL28A1Q2UY09 1125 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 EML3Q32P44 896 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 C2orf27AQ580R0 203 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 SDHAF4Q5VUM1 108 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 SPATA1Q5VX52 437 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 C9orf57Q5W0N0 161 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 RINT1Q6NUQ1 792 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 TMEM92Q6UXU6 159 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 ZPBP2Q6X784 338 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 KCNK18Q7Z418 384 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 PDZD3Q86UT5 571 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 MON1AQ86VX9 555 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 TTC30AQ86WT1 665 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 TMEFF1Q8IYR6 380 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 CCDC33Q8N5R6 958 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 C4orf32Q8N8J7 132 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 TMEM161BQ8NDZ6 487 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 OLIG1Q8TAK6 271 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 SNX29Q8TEQ0 813 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 USP33Q8TEY7 942 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 CNOT6LQ96LI5 555 aaKnown RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 BBC3Q96PG8 261 aaPredicted RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 FNBP1Q96RU3 617 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 SLC22A12Q96S37 553 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 CYP2S1Q96SQ9 504 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 NUSAP1Q9BXS6 441 aaKnown RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 DUS2Q9NX74 493 aaKnown RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 ABI2Q9NYB9 513 aaPredicted RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 LRWD1Q9UFC0 647 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 ZMYM5Q9UJ78 669 aa8.84□□□□□ -0.99
ITSN1-216ENST00000428240 MAGED2Q9UNF1 606 aaPredicted RBP8.84□□□□□ -0.99
ITSN1-216ENST00000428240 PIRO00625 290 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 EPB41L2O43491 1005 aaKnown RBP8.83□□□□□ -1
ITSN1-216ENST00000428240 FAM189A1O60320 539 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 CDC25AP30304 524 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 P2RY2P41231 377 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -1
ITSN1-216ENST00000428240 FAM160A1Q05DH4 1040 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 SCAPQ12770 1279 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 TRIM29Q14134 588 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 ZNF268Q14587 947 aaPredicted RBP8.83□□□□□ -1
ITSN1-216ENST00000428240 CRY1Q16526 586 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 JADE1Q6IE81 842 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 SYT12Q8IV01 421 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 SFTPA1Q8IWL2 248 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 EFCAB13Q8IY85 973 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 IGSF22Q8N9C0 903 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 SPPL2BQ8TCT7 592 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 SPIRE2Q8WWL2 714 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 MRPS31Q92665 395 aaKnown RBP8.83□□□□□ -1
ITSN1-216ENST00000428240 ATP2A3Q93084 1043 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 GTF3C6Q969F1 213 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 EXOC4Q96A65 974 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 LINC00597Q9H2U6 94 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 C17orf75Q9HAS0 396 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 TMLHEQ9NVH6 421 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 CIZ1Q9ULV3 898 aaPredicted RBP8.83□□□□□ -1
ITSN1-216ENST00000428240 MMP17Q9ULZ9 603 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 DNM3Q9UQ16 869 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 ATG2BQ96BY7 2078 aa8.83□□□□□ -1
ITSN1-216ENST00000428240 GCN1Q92616 2671 aaKnown RBP8.83□□□□□ -1
ITSN1-216ENST00000428240 TSC2P49815 1807 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 SETXQ7Z333 2677 aaKnown RBP8.82□□□□□ -1
ITSN1-216ENST00000428240 CITO14578 2027 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 ANO9A1A5B4 782 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 UPK3BL1B0FP48 263 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 UPK3BL2E5RIL1 263 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 H0Y626 953 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 CYB561D2O14569 222 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 TNFRSF10BO14763 440 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 XPOTO43592 962 aaKnown RBP8.82□□□□□ -1
ITSN1-216ENST00000428240 TRIM16O95361 564 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 ADRB2P07550 413 aa8.82□□□□□ -1
ITSN1-216ENST00000428240 NFICP08651 508 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms