RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 ZFYVE27Q5T4F4 411 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 C9orf57Q5W0N0 161 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 TAF2Q6P1X5 1199 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 XYLT1Q86Y38 959 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 EXD1Q8NHP7 514 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 JOSD2Q8TAC2 188 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 MAIP1Q8WWC4 291 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 LCMT1Q9UIC8 334 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 UBQLN1Q9UMX0 589 aaKnown RBP22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 KRT3P12035 628 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 CYP3A5P20815 502 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 RFC1P35251 1148 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 GPD2P43304 727 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 PIGHQ14442 188 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 NBPF20Q3BBV1 942 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 FAM228AQ86W67 206 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 LRRC52Q8N7C0 313 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 C12orf29Q8N999 325 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 ATG4AQ8WYN0 398 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 PIK3R5Q8WYR1 880 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 RNF25Q96BH1 459 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 FAM124BQ9H5Z6 455 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 METTL5Q9NRN9 209 aaKnown RBP22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 CHST7Q9NS84 486 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 TSPAN16Q9UKR8 245 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 IPPQ9Y573 584 aa22.99■■□□□ 1.27
CNEP1R1-202ENST00000427478 SMIM28A0A1B0GU29 152 aa22.98■■□□□ 1.27
CNEP1R1-202ENST00000427478 SIGLEC16A6NMB1 481 aa22.98■■□□□ 1.27
CNEP1R1-202ENST00000427478 PODXLO00592 558 aa22.98■■□□□ 1.27
CNEP1R1-202ENST00000427478 ANKS1BQ7Z6G8 1248 aa22.98■■□□□ 1.27
CNEP1R1-202ENST00000427478 GTF2IRD1Q9UHL9 959 aa22.98■■□□□ 1.27
CNEP1R1-202ENST00000427478 ADAM21Q9UKJ8 722 aa22.98■■□□□ 1.27
CNEP1R1-202ENST00000427478 TMEM88BA6NKF7 163 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 PI4K2BG5E9Z4 385 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 KRT1P04264 644 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 PSMA2P25787 234 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 MRPS6P82932 125 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 FAM47CQ5HY64 1035 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 TWF2Q6IBS0 349 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 GDF6Q6KF10 455 aaPredicted RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 SESTD1Q86VW0 696 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 IQCKQ8N0W5 287 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 GOLGA6L1Q8N7Z2 621 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 NIPA2Q8N8Q9 360 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 LRRC45Q96CN5 670 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 FMO2Q99518 471 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 SH3GL2Q99962 352 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 OSBPL8Q9BZF1 889 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 WDR35Q9P2L0 1181 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 CDY2AQ9Y6F7 541 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 ECEL1O95672 775 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 RPL21P46778 160 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 KLF1Q13351 362 aaPredicted RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 LCLAT1Q6UWP7 414 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 ACOT1Q86TX2 421 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 SMG8Q8ND04 991 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 UPF3AQ9H1J1 476 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 FAM204AQ9H8W3 233 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 SPC25Q9HBM1 224 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 ZDHHC18Q9NUE0 388 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 KIAA1257Q9ULG3 409 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 R3HDM2Q9Y2K5 976 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 NME7Q9Y5B8 376 aa22.97■■□□□ 1.27
CNEP1R1-202ENST00000427478 M0QZ92 97 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 OPA1O60313 960 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 RARBP10826 455 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 HSD17B3P37058 310 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 GSCP56915 257 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 GOLGA7BQ2TAP0 167 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 TXNRD3NBQ6F5E7 133 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 EMC1Q8N766 993 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 ACSF2Q96CM8 615 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 GOLGA2P5Q9HBQ8 144 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 CASP8AP2Q9UKL3 1982 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 PIK3R2O00459 728 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 SEPT4O43236 478 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 MYCNP04198 464 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 ATF7P17544 494 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 DRG2P55039 364 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 PLTPP55058 493 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 CAP1Q01518 475 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 TMC3Q7Z5M5 1100 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 ARRDC4Q8NCT1 418 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 WNT8BQ93098 351 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 RBM41Q96IZ5 413 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 DCLK3Q9C098 648 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 GRHL1Q9NZI5 618 aa22.96■■□□□ 1.27
CNEP1R1-202ENST00000427478 CD4P01730 458 aa22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 CTSHP09668 335 aa22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 GABRB2P47870 512 aa22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 CACNB2Q08289 660 aaPredicted RBP22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 NFX1Q12986 1120 aaKnown RBP22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 ZNF268Q14587 947 aaPredicted RBP22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 PPP1R7Q15435 360 aa22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 UAP1Q16222 522 aaPredicted RBP22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 XKR4Q5GH76 650 aa22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 PPP1R26Q5T8A7 1209 aaPredicted RBP22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 LRRC38Q5VT99 294 aa22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 ZDHHC24Q6UX98 284 aa22.95■■□□□ 1.26
CNEP1R1-202ENST00000427478 IPO4Q8TEX9 1081 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms