RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 TACC1O75410 805 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 CYP2F1P24903 491 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 ACOT1Q86TX2 421 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 ENOX1Q8TC92 643 aaKnown RBP13.39□□□□□ -0.27
SMIM12-203ENST00000426886 ADAMTS19Q8TE59 1207 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 HDAC7Q8WUI4 952 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 SUSD6Q92537 303 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 TAF4BQ92750 862 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 RIPOR3Q96MK2 946 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 NIF3L1Q9GZT8 377 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 THAP9Q9H5L6 903 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 ZDHHC7Q9NXF8 308 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 FAM50BQ9Y247 325 aa13.39□□□□□ -0.27
SMIM12-203ENST00000426886 GPR15P49685 360 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 NDST1P52848 882 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 MARSP56192 900 aaKnown RBP13.38□□□□□ -0.27
SMIM12-203ENST00000426886 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 GIPC2Q8TF65 315 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 KCNJ18B7U540 433 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 CLDN5O00501 218 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
SMIM12-203ENST00000426886 ALDH1A3P47895 512 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 MCCD1P59942 119 aaPredicted RBP13.38□□□□□ -0.27
SMIM12-203ENST00000426886 CETN1Q12798 172 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 KCNJ12Q14500 433 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 DDR2Q16832 855 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 PUS10Q3MIT2 529 aaKnown RBP13.38□□□□□ -0.27
SMIM12-203ENST00000426886 RRAGAQ7L523 313 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 SPATA2LQ8IUW3 424 aaPredicted RBP13.38□□□□□ -0.27
SMIM12-203ENST00000426886 CUL9Q8IWT3 2517 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 CORO1BQ9BR76 489 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 DNMT3BQ9UBC3 853 aaKnown RBP13.38□□□□□ -0.27
SMIM12-203ENST00000426886 CDH9Q9ULB4 789 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 PCDHB5Q9Y5E4 795 aa13.38□□□□□ -0.27
SMIM12-203ENST00000426886 XYLBO75191 536 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
SMIM12-203ENST00000426886 BDNFP23560 247 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 APBA1Q02410 837 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
SMIM12-203ENST00000426886 FAM114A1Q8IWE2 563 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 SCN4BQ8IWT1 228 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 C12orf29Q8N999 325 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 MYLPFQ96A32 169 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 PCED1BQ96HM7 432 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 TWNKQ96RR1 684 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 CEP72Q9P209 647 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 DOCK6Q96HP0 2047 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 MTHFRP42898 656 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 NFE2Q16621 373 aaPredicted RBP13.37□□□□□ -0.27
SMIM12-203ENST00000426886 ZSCAN23Q3MJ62 389 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 CT47A1Q5JQC4 288 aaPredicted RBP13.37□□□□□ -0.27
SMIM12-203ENST00000426886 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 B3GALNT2Q8NCR0 500 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 KAT5Q92993 513 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 TRIM44Q96DX7 344 aaPredicted RBP13.37□□□□□ -0.27
SMIM12-203ENST00000426886 UHRF1Q96T88 793 aaPredicted RBP13.37□□□□□ -0.27
SMIM12-203ENST00000426886 PHF7Q9BWX1 381 aaPredicted RBP13.37□□□□□ -0.27
SMIM12-203ENST00000426886 VPS16Q9H269 839 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 TAB2Q9NYJ8 693 aa13.37□□□□□ -0.27
SMIM12-203ENST00000426886 BDP1A6H8Y1 2624 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 N4BP1O75113 896 aaKnown RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 C1RP00736 705 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 HNRNPA1P09651 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 MYL5Q02045 173 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 TCP11X2Q5H9J9 407 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 GET4Q7L5D6 327 aaPredicted RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 CMASQ8NFW8 434 aaPredicted RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 ZNF512Q96ME7 567 aaPredicted RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 PKMYT1Q99640 499 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 BCO2Q9BYV7 579 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 CD320Q9NPF0 282 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 CISHQ9NSE2 258 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 FAM49BQ9NUQ9 324 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 GCNT4Q9P109 453 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 GJA1P17302 382 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 SLC9A1P19634 815 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 TUFMP49411 452 aaKnown RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 FAM171BQ6P995 826 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 ELMOD1Q8N336 334 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 EHBP1Q8NDI1 1231 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 MYCBPAPQ8TBZ2 947 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 SPPL2BQ8TCT7 592 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 ING5Q8WYH8 240 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 MED10Q9BTT4 135 aa13.36□□□□□ -0.27
SMIM12-203ENST00000426886 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 WDR6Q9NNW5 1121 aaKnown RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 MAGED2Q9UNF1 606 aaPredicted RBP13.36□□□□□ -0.27
SMIM12-203ENST00000426886 RHOP08100 348 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms