RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ATP5HO75947 161 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 ARIH2O95376 493 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 VTNP04004 478 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 SFSWAPQ12872 951 aaKnown RBP16.79■□□□□ 0.28
PKP4-205ENST00000426248 FYB2Q5VWT5 728 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 CCDC62Q6P9F0 684 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 C7orf31Q8N865 590 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 RAET1EQ8TD07 263 aa16.79■□□□□ 0.28
PKP4-205ENST00000426248 IGSF9BQ9UPX0 1349 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 A0A0G2JND7 137 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 RBM47A0AV96 593 aaKnown RBP16.78■□□□□ 0.28
PKP4-205ENST00000426248 PRKCBP05771 671 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 ALADP13716 330 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 GJB7Q6PEY0 223 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 SYCE1Q8N0S2 351 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 NME8Q8N427 588 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 ASAP3Q8TDY4 903 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 LENG1Q96BZ8 264 aaPredicted RBP16.78■□□□□ 0.28
PKP4-205ENST00000426248 NT5C1BQ96P26 610 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
PKP4-205ENST00000426248 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 SSU72P8A0A1W2PR75 194 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 CD19P15391 556 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 BEX3Q00994 111 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 CNPY1Q3B7I2 92 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 MIIPQ5JXC2 388 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 GRAMD4Q6IC98 578 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 RIBC1Q8N443 379 aaPredicted RBP16.78■□□□□ 0.28
PKP4-205ENST00000426248 ATP8B4Q8TF62 1192 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 TLCD1Q96CP7 247 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
PKP4-205ENST00000426248 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 TJP3O95049 919 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 FCGRTP55899 365 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 BFSP1Q12934 665 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 DEFB115Q30KQ5 88 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 CST9Q5W186 159 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 SLFN12LQ6IEE8 588 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 ERP44Q9BS26 406 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 DENND2DQ9H6A0 471 aaPredicted RBP16.78■□□□□ 0.28
PKP4-205ENST00000426248 SETD4Q9NVD3 440 aa16.78■□□□□ 0.28
PKP4-205ENST00000426248 RBAKQ9NYW8 714 aaPredicted RBP16.78■□□□□ 0.28
PKP4-205ENST00000426248 ABLIM1O14639 778 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 CIB2O75838 187 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 PHKA2P46019 1235 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 NLRP11P59045 1033 aaKnown RBP16.77■□□□□ 0.28
PKP4-205ENST00000426248 CBX3Q13185 183 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 KBTBD12Q3ZCT8 623 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 LRRC74BQ6ZQY2 392 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 PHC3Q8NDX5 983 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 SHCBP1Q8NEM2 672 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 MRPL4Q9BYD3 311 aaKnown RBP16.77■□□□□ 0.28
PKP4-205ENST00000426248 O00370 1275 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 DNAJC6O75061 913 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 DCTN3O75935 186 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 CETN2P41208 172 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 PHLDB2Q86SQ0 1253 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 RNF25Q96BH1 459 aaPredicted RBP16.77■□□□□ 0.28
PKP4-205ENST00000426248 FAM161BQ96MY7 647 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 VTA1Q9NP79 307 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 PCDHGA4Q9Y5G9 962 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 CDK5RAP2Q96SN8 1893 aa16.77■□□□□ 0.28
PKP4-205ENST00000426248 NFASCO94856 1347 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 BTKQ06187 659 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 THOC5Q13769 683 aaKnown RBP16.77■□□□□ 0.27
PKP4-205ENST00000426248 IZUMO2Q6UXV1 221 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 LRRC55Q6ZSA7 311 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 GPD1LQ8N335 351 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 UBN1Q9NPG3 1134 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 FMO5P49326 533 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 MXD4Q14582 209 aaPredicted RBP16.77■□□□□ 0.27
PKP4-205ENST00000426248 SGSM1Q2NKQ1 1148 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 IER5Q5VY09 327 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 ECHDC2Q86YB7 292 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 JAMLQ86YT9 394 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 PGM2Q96G03 612 aa16.77■□□□□ 0.27
PKP4-205ENST00000426248 PASKQ96RG2 1323 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 POC1B-GALNT4F8VUJ3 575 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 PJA2O43164 708 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 KPNB1Q14974 876 aaKnown RBP16.76■□□□□ 0.27
PKP4-205ENST00000426248 HIPK4Q8NE63 616 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 WDR60Q8WVS4 1066 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
PKP4-205ENST00000426248 MIS12Q9H081 205 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 LGALS2P05162 132 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 CTSHP09668 335 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 CD58P19256 250 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 CPA2P48052 419 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 BPIFB4P59827 614 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 KIZQ2M2Z5 673 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 KHDC1Q4VXA5 237 aaKnown RBP16.76■□□□□ 0.27
PKP4-205ENST00000426248 TMEM63BQ5T3F8 832 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 OLFM3Q96PB7 478 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 CEP72Q9P209 647 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 RASA4BC9J798 803 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 E7ENQ6 273 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 RASA4O43374 803 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms