RNA–Protein interactions for RNA: ENST00000425872.1

HMGN2P17-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 17, humanhuman

BASIC

Gene HMGN2P17, Length 743 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P17-201ENST00000425872 NHEJ1Q9H9Q4 299 aaPredicted RBP11.92□□□□□ -0.5
HMGN2P17-201ENST00000425872 STK39Q9UEW8 545 aa11.92□□□□□ -0.5
HMGN2P17-201ENST00000425872 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
HMGN2P17-201ENST00000425872 BZW2Q9Y6E2 419 aaKnown RBP11.92□□□□□ -0.5
HMGN2P17-201ENST00000425872 EPN1Q9Y6I3 576 aaPredicted RBP11.92□□□□□ -0.5
HMGN2P17-201ENST00000425872 SSU72P8A0A1W2PR75 194 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 PER2O15055 1255 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 CYP26A1O43174 497 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 CCDC172P0C7W6 258 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 KRT5P13647 590 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 P4HA1P13674 534 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 IGFBP6P24592 240 aaPredicted RBP11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 RPL9P32969 192 aaKnown RBP11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 USP8P40818 1118 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 PNPLA4P41247 253 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 CDH8P55286 799 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 BCAR1P56945 870 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 TUSC3Q13454 348 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 ASTE1Q2TB18 679 aaPredicted RBP11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 TDRD12Q587J7 1177 aaKnown RBP11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 SMYD5Q6GMV2 418 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 SCARA5Q6ZMJ2 495 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 KIAA1524Q8TCG1 905 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 URGCPQ8TCY9 931 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 ZBP1Q9H171 429 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 HAUS4Q9H6D7 363 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 CYP3A43Q9HB55 503 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 TBC1D13Q9NVG8 400 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 KANSL3Q9P2N6 904 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 CACNG4Q9UBN1 327 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 MUTYHQ9UIF7 546 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 PCDHB4Q9Y5E5 795 aa11.91□□□□□ -0.5
HMGN2P17-201ENST00000425872 CASTOR2A6NHX0 329 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 HIDE1A8MVS5 230 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 KPNA7A9QM74 516 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 PODXLO00592 558 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 SPTLC1O15269 473 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 DDHD2O94830 711 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 RAP1GAPP47736 663 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 TAF6P49848 677 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 CLCNKBP51801 687 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 LILRA4P59901 499 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 YWHAEP62258 255 aaKnown RBP11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 TNNC1P63316 161 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 PTK2Q05397 1052 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 UPP1Q16831 310 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 ANKRD54Q6NXT1 300 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 ZNF571Q7Z3V5 609 aaPredicted RBP11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 CCDC170Q8IYT3 715 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 DDX27Q96GQ7 796 aaKnown RBP11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 CCDC42Q96M95 316 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 NECTIN4Q96NY8 510 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 MMS19Q96T76 1030 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 PAAF1Q9BRP4 392 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 KCNH6Q9H252 994 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 SMYD3Q9H7B4 428 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 CISHQ9NSE2 258 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 DZANK1Q9NVP4 752 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 GDAP2Q9NXN4 497 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 SNX9Q9Y5X1 595 aa11.9□□□□□ -0.5
HMGN2P17-201ENST00000425872 SCN1AP35498 2009 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 C2orf71A6NGG8 1288 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 B4GALT3O60512 393 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 NDUFA10O95299 355 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 CD58P19256 250 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 CYLC1P35663 651 aaPredicted RBP11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 ZNF132P52740 706 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 BPIFB4P59827 614 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 DSC1Q08554 894 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 SV2CQ496J9 727 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 TMEM270Q6UE05 265 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 CD300LGQ6UXG3 332 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 TOGARAM2Q6ZUX3 1019 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 LIMS2Q7Z4I7 341 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 SLC47A2Q86VL8 602 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 ZNF280BQ86YH2 543 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 COLGALT2Q8IYK4 626 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 MRPL43Q8N983 215 aaKnown RBP11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 RBBP8NLQ8NC74 664 aaPredicted RBP11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 C3orf58Q8NDZ4 430 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 OLIG1Q8TAK6 271 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 EPS8L1Q8TE68 723 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 WHAMMQ8TF30 809 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 IGSF21Q96ID5 467 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 UROC1Q96N76 676 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 ACP6Q9NPH0 428 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 HCFC2Q9Y5Z7 792 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 IRAK3Q9Y616 596 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 ADGRG1Q9Y653 693 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 VWA8A3KMH1 1905 aa11.89□□□□□ -0.51
HMGN2P17-201ENST00000425872 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
HMGN2P17-201ENST00000425872 DDX3XO00571 662 aaKnown RBP eCLIP11.88□□□□□ -0.51
HMGN2P17-201ENST00000425872 ZNF263O14978 683 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms