RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SDHAF4Q5VUM1 108 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 PHLDB3Q6NSJ2 640 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 VITQ6UXI7 678 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 TMEM150AQ86TG1 271 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 ITIH5Q86UX2 942 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 GUF1Q8N442 669 aaKnown RBP19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 STKLD1Q8NE28 680 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 ELMO3Q96BJ8 720 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 PRRX2Q99811 253 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 TBC1D17Q9HA65 648 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 CRTAC1Q9NQ79 661 aa19.65■□□□□ 0.74
SMARCAL1-205ENST00000425815 SHISA7A6NL88 538 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 GALR2O43603 387 aaPredicted RBP19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 CALUO43852 315 aaPredicted RBP19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 TACC1O75410 805 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 PDGFRBP09619 1106 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 FAM163BP0C2L3 166 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 GABRR2P28476 465 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 DDR2Q16832 855 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 WDR72Q3MJ13 1102 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 ZCWPW2Q504Y3 356 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 GPIHBP1Q8IV16 184 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 SMYD4Q8IYR2 804 aaPredicted RBP19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 FAM200AQ8TCP9 573 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 LRRC3BQ96PB8 259 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 MMS19Q96T76 1030 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 GPR88Q9GZN0 384 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 ATXN3LQ9H3M9 355 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 ABCB6Q9NP58 842 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 CDH9Q9ULB4 789 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 MUC6Q6W4X9 2439 aa19.64■□□□□ 0.73
SMARCAL1-205ENST00000425815 TCHHQ07283 1943 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 AKAP3O75969 853 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 F11P03951 625 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 PCSK1P29120 753 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 ATICP31939 592 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 GNL1P36915 607 aaPredicted RBP19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 PSMC1P62191 440 aaKnown RBP19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 TRPC3Q13507 836 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 GRM2Q14416 872 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 CFAP221Q4G0U5 840 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 SPATA20Q8TB22 786 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 TMC2Q8TDI7 906 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 ERCC4Q92889 916 aaPredicted RBP19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 CCDC47Q96A33 483 aaKnown RBP19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 PHOX2BQ99453 314 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 SYT15Q9BQS2 421 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 DDX23Q9BUQ8 820 aaKnown RBP19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 VRTNQ9H8Y1 702 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 DLGAP2Q9P1A6 1054 aa19.63■□□□□ 0.73
SMARCAL1-205ENST00000425815 KMT2EQ8IZD2 1858 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 HEPACAM2A8MVW5 462 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 KIF20AO95235 890 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 AP3M2P53677 418 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 PTPN5P54829 565 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 MCCD1P59942 119 aaPredicted RBP19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 CYP4F8P98187 520 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 FAM160A1Q05DH4 1040 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 VEPH1Q14D04 833 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 MLF2Q15773 248 aaPredicted RBP19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 CEP135Q66GS9 1140 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 ARID3BQ8IVW6 561 aaPredicted RBP19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 SLC46A2Q9BY10 475 aa19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 NXF1Q9UBU9 619 aaKnown RBP19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 MTF2Q9Y483 593 aaPredicted RBP19.62■□□□□ 0.73
SMARCAL1-205ENST00000425815 GOLGA6L4A6NEF3 574 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 STK25O00506 426 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 MAPK13O15264 365 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 PHACTR2O75167 634 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 FGF19O95750 216 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 GLULP15104 373 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 NR2F2P24468 414 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 CDH8P55286 799 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 PFKPQ01813 784 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 NCOA4Q13772 614 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 ZACNQ401N2 412 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 GPR158Q5T848 1215 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 SV2AQ7L0J3 742 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 MFSD6LQ8IWD5 586 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 MYLPFQ96A32 169 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 FUBP3Q96I24 572 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 TRMT61BQ9BVS5 477 aaKnown RBP19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 FOXQ1Q9C009 403 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 DPEP3Q9H4B8 488 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 SLITRK6Q9H5Y7 841 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 TASP1Q9H6P5 420 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 FRMD4BQ9Y2L6 1034 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 PCDHA5Q9Y5H7 936 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 COL4A3Q01955 1670 aa19.61■□□□□ 0.73
SMARCAL1-205ENST00000425815 H0Y858 1186 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 ARNTLO00327 626 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 IKBKBO14920 756 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 GADD45BO75293 160 aaPredicted RBP19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 LRRN2O75325 713 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 NOL4O94818 638 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 DCNP07585 359 aaKnown RBP19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 PSMC3P17980 439 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 CD72P21854 359 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 WEE1P30291 646 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms