RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
COL12A1-205ENST00000425443 ENPEPQ07075 957 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 MYO1EQ12965 1108 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 FASTKD3Q14CZ7 662 aaKnown RBP13.69□□□□□ -0.22
COL12A1-205ENST00000425443 SPATA21Q7Z572 469 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 ZBTB8OSQ8IWT0 167 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 LRRC71Q8N4P6 559 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 RNF149Q8NC42 400 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 L3MBTL3Q96JM7 780 aaPredicted RBP13.69□□□□□ -0.22
COL12A1-205ENST00000425443 EURLQ9NYK6 297 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 WDR81Q562E7 1941 aa13.69□□□□□ -0.22
COL12A1-205ENST00000425443 FARP2O94887 1054 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 TNFSF9P41273 254 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 WDR4P57081 412 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 IZUMO3Q5VZ72 239 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 ECHDC2Q86YB7 292 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 MPHOSPH6Q99547 160 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 TACO1Q9BSH4 297 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 MRPL4Q9BYD3 311 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 NIFKQ9BYG3 293 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 NSRP1Q9H0G5 558 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 BTBD7Q9P203 1132 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 ZNF148Q9UQR1 794 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 STYXL1Q9Y6J8 313 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 ATG7O95352 703 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 ANP32DO95626 131 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 CYP1A1P04798 512 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 STX2P32856 288 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 MCCD1P59942 119 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 COPS2P61201 443 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 NOMO3P69849 1222 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 CLDN10P78369 228 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 MAPK6Q16659 721 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 P3H1Q32P28 736 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 SYCP2LQ5T4T6 812 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 MON1BQ7L1V2 547 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 TMEM110Q86TL2 294 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 CDR2LQ86X02 465 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 MTMR12Q9C0I1 747 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 SPATC1LQ9H0A9 340 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 PARVAQ9NVD7 372 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 SAE1Q9UBE0 346 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 USP2O75604 605 aaPredicted RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 TMEM191BP0C7N4 346 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 EZRP15311 586 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 TAC1P20366 129 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 ACO1P21399 889 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 EFNA5P52803 228 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 MAMLD1Q13495 774 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 ASRGL1Q7L266 308 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 TRIM50Q86XT4 487 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 NSMCE1Q8WV22 266 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 UTP4Q969X6 686 aaKnown RBP13.68□□□□□ -0.22
COL12A1-205ENST00000425443 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 EBF2Q9HAK2 575 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 PPP2R3BQ9Y5P8 575 aa13.68□□□□□ -0.22
COL12A1-205ENST00000425443 INO80B-WBP1J3KQ70 363 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 ZSCAN9O15535 394 aaPredicted RBP13.67□□□□□ -0.22
COL12A1-205ENST00000425443 BANF1O75531 89 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 CST3P01034 146 aaPredicted RBP13.67□□□□□ -0.22
COL12A1-205ENST00000425443 KRT19P08727 400 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 ALADP13716 330 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 SLC8A1P32418 973 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 ERICH1Q86X53 443 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 RHPN2Q8IUC4 686 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 NLRP4Q96MN2 994 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 TRAIPQ9BWF2 469 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 INO80BQ9C086 356 aaPredicted RBP13.67□□□□□ -0.22
COL12A1-205ENST00000425443 TMEM134Q9H6X4 195 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 SMAPO00193 183 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 TOM1L1O75674 476 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 PRKCBP05771 671 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 PGK2P07205 417 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 GBP2P32456 591 aaPredicted RBP13.67□□□□□ -0.22
COL12A1-205ENST00000425443 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
COL12A1-205ENST00000425443 MYL6P60660 151 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 ORC1Q13415 861 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 TMEM130Q8N3G9 435 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 SLCO1B3Q9NPD5 702 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 ARHGEF3Q9NR81 526 aa13.67□□□□□ -0.22
COL12A1-205ENST00000425443 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 TTLL13PA6NNM8 815 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 SUN1O94901 812 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 PIGRP01833 764 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 EDN1P05305 212 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 IMPDH2P12268 514 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 CD19P15391 556 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 KLRC2P26717 231 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
COL12A1-205ENST00000425443 R3HDM1Q15032 1099 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms