RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 GDAP2Q9NXN4 497 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 NCDNQ9UBB6 729 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 SIX4Q9UIU6 781 aa19.08■□□□□ 0.64
GPC1-203ENST00000425056 ZNF638Q14966 1978 aaKnown RBP19.08■□□□□ 0.64
GPC1-203ENST00000425056 HUS1O60921 280 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 PPP6R2O75170 966 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 NLRP12P59046 1061 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 BFSP1Q12934 665 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 INTS6LQ5JSJ4 861 aaKnown RBP19.07■□□□□ 0.64
GPC1-203ENST00000425056 SCARA3Q6AZY7 606 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 STXBP4Q6ZWJ1 553 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 CMTM8Q8IZV2 173 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 CSGALNACT2Q8N6G5 542 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 CELF5Q8N6W0 485 aaKnown RBP19.07■□□□□ 0.64
GPC1-203ENST00000425056 GLIS3Q8NEA6 775 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 PKMYT1Q99640 499 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 SLC46A2Q9BY10 475 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 CUEDC2Q9H467 287 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 PCIF1Q9H4Z3 704 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 KBTBD4Q9NVX7 518 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 DDX43Q9NXZ2 648 aaKnown RBP19.07■□□□□ 0.64
GPC1-203ENST00000425056 GTSE1Q9NYZ3 720 aa19.07■□□□□ 0.64
GPC1-203ENST00000425056 SPTLC2O15270 562 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 PAPSS2O95340 614 aaPredicted RBP19.06■□□□□ 0.64
GPC1-203ENST00000425056 F11P03951 625 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 TMEM191BP0C7N4 346 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 CSH1P0DML2 217 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 CSH2P0DML3 217 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 DDX6P26196 483 aaKnown RBP eCLIP19.06■□□□□ 0.64
GPC1-203ENST00000425056 MYL7Q01449 175 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 SATB1Q01826 763 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 SPEM1Q8N4L4 309 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 TOP6BLQ8N6T0 577 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 PI4K2AQ9BTU6 479 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 TRIM9Q9C026 710 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 LRRC27Q9C0I9 530 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 SNX9Q9Y5X1 595 aa19.06■□□□□ 0.64
GPC1-203ENST00000425056 PTPRJQ12913 1337 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 SOBPA7XYQ1 873 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 GABRDO14764 452 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 PRPF40AO75400 957 aaKnown RBP19.05■□□□□ 0.64
GPC1-203ENST00000425056 YEATS4O95619 227 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 KRT19P08727 400 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 CXCL12P48061 93 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 GPR15P49685 360 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 RBP5P82980 135 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 TNK2Q07912 1038 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 DGKKQ5KSL6 1271 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 CNNM4Q6P4Q7 775 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 OSTM1Q86WC4 334 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 ADGRF2Q8IZF7 708 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 NOC3LQ8WTT2 800 aaKnown RBP19.05■□□□□ 0.64
GPC1-203ENST00000425056 SECISBP2LQ93073 1101 aaKnown RBP19.05■□□□□ 0.64
GPC1-203ENST00000425056 ANKRD36BP1Q96IX9 119 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 SMG9Q9H0W8 520 aaKnown RBP19.05■□□□□ 0.64
GPC1-203ENST00000425056 KIF9Q9HAQ2 790 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 RBM12Q9NTZ6 932 aaKnown RBP19.05■□□□□ 0.64
GPC1-203ENST00000425056 INTS13Q9NVM9 706 aa19.05■□□□□ 0.64
GPC1-203ENST00000425056 THG1LQ9NWX6 298 aaKnown RBP19.05■□□□□ 0.64
GPC1-203ENST00000425056 PTPRDP23468 1912 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 GREB1Q4ZG55 1949 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 TULP1O00294 542 aaPredicted RBP19.04■□□□□ 0.64
GPC1-203ENST00000425056 EIF3DO15371 548 aaKnown RBP eCLIP19.04■□□□□ 0.64
GPC1-203ENST00000425056 TADA3O75528 432 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 ACAT1P24752 427 aaKnown RBP19.04■□□□□ 0.64
GPC1-203ENST00000425056 PCSK1P29120 753 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 HOXD13P35453 343 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 AVPR1AP37288 418 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 LHX1P48742 406 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 RPL10AP62906 217 aaKnown RBP19.04■□□□□ 0.64
GPC1-203ENST00000425056 CCINQ13939 588 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 ITPRIPL2Q3MIP1 535 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 CFAP221Q4G0U5 840 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 LMBRD2Q68DH5 695 aaPredicted RBP19.04■□□□□ 0.64
GPC1-203ENST00000425056 Q6ZS52 159 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 LIMS2Q7Z4I7 341 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 CBWD2Q8IUF1 395 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 GPR161Q8N6U8 529 aaKnown RBP19.04■□□□□ 0.64
GPC1-203ENST00000425056 MAB21L3Q8N8X9 362 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 STKLD1Q8NE28 680 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 TTC8Q8TAM2 541 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 HPS3Q969F9 1004 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 TRMT2BQ96GJ1 504 aaKnown RBP19.04■□□□□ 0.64
GPC1-203ENST00000425056 FUBP3Q96I24 572 aaKnown RBP eCLIP19.04■□□□□ 0.64
GPC1-203ENST00000425056 ZNF396Q96N95 335 aaPredicted RBP19.04■□□□□ 0.64
GPC1-203ENST00000425056 DLL3Q9NYJ7 618 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 CCL26Q9Y258 94 aa19.04■□□□□ 0.64
GPC1-203ENST00000425056 ZNF233A6NK53 670 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 CUTAO60888 179 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 NOL4O94818 638 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 CYP2F1P24903 491 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 ASIC1P78348 528 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 PUM1Q14671 1186 aaKnown RBP eCLIP19.03■□□□□ 0.64
GPC1-203ENST00000425056 PON2Q15165 354 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 SURF1Q15526 300 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 CCDC142Q17RM4 750 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 SOWAHAQ2M3V2 549 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 SDHAF4Q5VUM1 108 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 EPM2AIP1Q7L775 607 aaPredicted RBP19.03■□□□□ 0.64
GPC1-203ENST00000425056 DPH6Q7L8W6 267 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms