RNA–Protein interactions for RNA: ENST00000424647.1

PPM1F-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2

Gene PPM1F, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-204ENST00000424647 SIT1Q9Y3P8 196 aa17.41■□□□□ 0.38
PPM1F-204ENST00000424647 DPYSL4O14531 572 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 CALUO43852 315 aaPredicted RBP17.4■□□□□ 0.38
PPM1F-204ENST00000424647 RHOBTB3O94955 611 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 ZNF202O95125 648 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 NR3C1P04150 777 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 VIPR2P41587 438 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 AP3M2P53677 418 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 RPL10AP62906 217 aaKnown RBP17.4■□□□□ 0.38
PPM1F-204ENST00000424647 DPYDQ12882 1025 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 STXBP5Q5T5C0 1151 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 GPR158Q5T848 1215 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 C4orf50Q6ZRC1 276 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 TPRG1Q6ZUI0 275 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 GAREM2Q75VX8 874 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 ALYREFQ86V81 257 aaKnown RBP17.4■□□□□ 0.38
PPM1F-204ENST00000424647 SLC9A9Q8IVB4 645 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 YAF2Q8IY57 180 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 PJA1Q8NG27 643 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 IRF7Q92985 503 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 FOXQ1Q9C009 403 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 KCTD10Q9H3F6 313 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 FAM86C1Q9NVL1 165 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 GTF3C4Q9UKN8 822 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 CDH9Q9ULB4 789 aa17.4■□□□□ 0.38
PPM1F-204ENST00000424647 KANSL1LA0AUZ9 987 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 HEPACAM2A8MVW5 462 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 HCRTO43612 131 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 CSH1P0DML2 217 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 CSH2P0DML3 217 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 WARSP23381 471 aaKnown RBP17.39■□□□□ 0.37
PPM1F-204ENST00000424647 GDI1P31150 447 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 CASP4P49662 377 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 MRE11P49959 708 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 PSMC1P62191 440 aaKnown RBP17.39■□□□□ 0.37
PPM1F-204ENST00000424647 CYP4F8P98187 520 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 UBXN2BQ14CS0 331 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 MAPRE1Q15691 268 aaKnown RBP17.39■□□□□ 0.37
PPM1F-204ENST00000424647 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 CEP135Q66GS9 1140 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 VITQ6UXI7 678 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 KBTBD7Q8WVZ9 684 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.37
PPM1F-204ENST00000424647 FUBP3Q96I24 572 aaKnown RBP eCLIP17.39■□□□□ 0.37
PPM1F-204ENST00000424647 PKMYT1Q99640 499 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 SNX25Q9H3E2 840 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 MAGED2Q9UNF1 606 aaPredicted RBP17.39■□□□□ 0.37
PPM1F-204ENST00000424647 FRMD4BQ9Y2L6 1034 aa17.39■□□□□ 0.37
PPM1F-204ENST00000424647 LRRIQ3A6PVS8 624 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 ZNF263O14978 683 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 CST3P01034 146 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 DCNP07585 359 aaKnown RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 CYP2F1P24903 491 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 ATICP31939 592 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 GPR15P49685 360 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 MYL6P60660 151 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 KCNB1Q14721 858 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 CFAP221Q4G0U5 840 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 LIMS2Q7Z4I7 341 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 ARID3BQ8IVW6 561 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 MFSD6LQ8IWD5 586 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 SCN4BQ8IWT1 228 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 TMEM174Q8WUU8 243 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 MYLPFQ96A32 169 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 DDX23Q9BUQ8 820 aaKnown RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 GZF1Q9H116 711 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 TASP1Q9H6P5 420 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 IL21Q9HBE4 155 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 HEBP1Q9NRV9 189 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 DMAC2Q9NW81 257 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 UXTQ9UBK9 157 aaPredicted RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 ZMYM5Q9UJ78 669 aa17.38■□□□□ 0.37
PPM1F-204ENST00000424647 MRPS17Q9Y2R5 130 aaKnown RBP17.38■□□□□ 0.37
PPM1F-204ENST00000424647 MYBPHLA2RUH7 354 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 TACC1O75410 805 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 STAU1O95793 577 aaKnown RBP17.37■□□□□ 0.37
PPM1F-204ENST00000424647 ANGPT1Q15389 498 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 DDR2Q16832 855 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 CCDC142Q17RM4 750 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 ZNF699Q32M78 642 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 SDHAF4Q5VUM1 108 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 TDRD10Q5VZ19 366 aaKnown RBP17.37■□□□□ 0.37
PPM1F-204ENST00000424647 ZNF852Q6ZMS4 543 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 OR6B3Q8NGW1 331 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 PLEKHO2Q8TD55 490 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 PARD3BQ8TEW8 1205 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 ZNF516Q92618 1163 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 MRPL45Q9BRJ2 306 aaKnown RBP17.37■□□□□ 0.37
PPM1F-204ENST00000424647 MKNK1Q9BUB5 465 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 LTB4R2Q9NPC1 389 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 MAGEC2Q9UBF1 373 aaPredicted RBP17.37■□□□□ 0.37
PPM1F-204ENST00000424647 NXF1Q9UBU9 619 aaKnown RBP17.37■□□□□ 0.37
PPM1F-204ENST00000424647 TRAF3IP3Q9Y228 551 aa17.37■□□□□ 0.37
PPM1F-204ENST00000424647 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
PPM1F-204ENST00000424647 FAM163BP0C2L3 166 aa17.36■□□□□ 0.37
PPM1F-204ENST00000424647 HMGA1P17096 107 aaKnown RBP17.36■□□□□ 0.37
PPM1F-204ENST00000424647 NR2F2P24468 414 aa17.36■□□□□ 0.37
PPM1F-204ENST00000424647 LMO2P25791 158 aa17.36■□□□□ 0.37
PPM1F-204ENST00000424647 DDX6P26196 483 aaKnown RBP eCLIP17.36■□□□□ 0.37
PPM1F-204ENST00000424647 GNL1P36915 607 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms