RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 NFE2Q16621 373 aaPredicted RBP19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 FLCNQ8NFG4 579 aa19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 SPATA20Q8TB22 786 aa19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 ELSPBP1Q96BH3 223 aa19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 RSPRY1Q96DX4 576 aa19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 MFSD1Q9H3U5 465 aa19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 CRTAC1Q9NQ79 661 aa19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 R3HCC1Q9Y3T6 440 aaKnown RBP19.11■□□□□ 0.65
SBDSP1-202ENST00000423945 GOLGA6L4A6NEF3 574 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 GADD45BO75293 160 aaPredicted RBP19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 AKAP3O75969 853 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 KIF20AO95235 890 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 HMGA1P17096 107 aaKnown RBP19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 CYP2F1P24903 491 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 GABRR2P28476 465 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 PCSK1P29120 753 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 VIPR2P41587 438 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 CLCN5P51795 746 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 PSMC1P62191 440 aaKnown RBP19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 TCF15Q12870 199 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 WDR72Q3MJ13 1102 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 SDHAF4Q5VUM1 108 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 TMEM150AQ86TG1 271 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 ZSCAN18Q8TBC5 510 aaPredicted RBP19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 TMC2Q8TDI7 906 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 SMARCD2Q92925 531 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 TIGD1Q96MW7 591 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 MMS19Q96T76 1030 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 SYT15Q9BQS2 421 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 VRTNQ9H8Y1 702 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 TRPV4Q9HBA0 871 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 ARHGEF3Q9NR81 526 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 CIZ1Q9ULV3 898 aaPredicted RBP19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 PCDHA5Q9Y5H7 936 aa19.1■□□□□ 0.65
SBDSP1-202ENST00000423945 TACC1O75410 805 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 PDGFRBP09619 1106 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 AOC1P19801 751 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 NR2F2P24468 414 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 GRM2Q14416 872 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 DDR2Q16832 855 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 ZACNQ401N2 412 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 VITQ6UXI7 678 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 ITIH5Q86UX2 942 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 FAM200AQ8TCP9 573 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 ABCB6Q9NP58 842 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 CDH9Q9ULB4 789 aa19.09■□□□□ 0.65
SBDSP1-202ENST00000423945 CACNA1HO95180 2353 aa19.08■□□□□ 0.65
SBDSP1-202ENST00000423945 MAPK13O15264 365 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 FAM163BP0C2L3 166 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 ATICP31939 592 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 PRCPP42785 496 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 AP3M2P53677 418 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 MCCD1P59942 119 aaPredicted RBP19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 CYP4F8P98187 520 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 BIRC3Q13489 604 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 TRPC3Q13507 836 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 NCOA4Q13772 614 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 VEPH1Q14D04 833 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 CFAP221Q4G0U5 840 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 GPIHBP1Q8IV16 184 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 GSDMAQ96QA5 445 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 SDCBP2Q9H190 292 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 ATXN3LQ9H3M9 355 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 DPEP3Q9H4B8 488 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 SMYD3Q9H7B4 428 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 TBC1D17Q9HA65 648 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 ZFP14Q9HCL3 533 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 TICRRQ7Z2Z1 1910 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 ANAPC1Q9H1A4 1944 aa19.08■□□□□ 0.64
SBDSP1-202ENST00000423945 SHISA7A6NL88 538 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 PHACTR2O75167 634 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 F11P03951 625 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 NHLH1Q02575 133 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 COBLL1Q53SF7 1204 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 ZNF658Q5TYW1 1059 aaPredicted RBP19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 SV2AQ7L0J3 742 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 MYLPFQ96A32 169 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 SYAP1Q96A49 352 aaPredicted RBP19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 FUBP3Q96I24 572 aaKnown RBP eCLIP19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 LRRC3BQ96PB8 259 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 GPR88Q9GZN0 384 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 NXF1Q9UBU9 619 aaKnown RBP19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 FRMD4BQ9Y2L6 1034 aa19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 KIF26AQ9ULI4 1882 aaPredicted RBP19.07■□□□□ 0.64
SBDSP1-202ENST00000423945 MIA3Q5JRA6 1907 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 IKBKBO14920 756 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 TADA3O75528 432 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 TRIM49P0CI25 452 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 TRIM49CP0CI26 452 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 GNL1P36915 607 aaPredicted RBP19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 MAGEA11P43364 429 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 RAP1GAPP47736 663 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 VAMP7P51809 220 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 PMS1P54277 932 aaKnown RBP19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 CDH8P55286 799 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 STARD6P59095 220 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 TNNC1P63316 161 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 PPP3CAQ08209 521 aa19.06■□□□□ 0.64
SBDSP1-202ENST00000423945 ADAM9Q13443 819 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms