RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.53
USP49-204ENST00000423567 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 SCARA3Q6AZY7 606 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 ISM2Q6H9L7 571 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 C4orf50Q6ZRC1 276 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 LRRTM3Q86VH5 581 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 OSTM1Q86WC4 334 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 OR6B3Q8NGW1 331 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 ITFG1Q8TB96 612 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 ING5Q8WYH8 240 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 TAF4BQ92750 862 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 DHTKD1Q96HY7 919 aaPredicted RBP11.71□□□□□ -0.53
USP49-204ENST00000423567 SYT15Q9BQS2 421 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.53
USP49-204ENST00000423567 CRISPLD1Q9H336 500 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 ABCB6Q9NP58 842 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 MAN1B1Q9UKM7 699 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 CDH9Q9ULB4 789 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 SCN1AP35498 2009 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 BICDL2A1A5D9 508 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 SLC16A3O15427 465 aaKnown RBP11.7□□□□□ -0.54
USP49-204ENST00000423567 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 CEBPBP17676 345 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 CCNE1P24864 410 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 RPL10AP62906 217 aaKnown RBP11.7□□□□□ -0.54
USP49-204ENST00000423567 HTR4Q13639 388 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 SLC5A9Q2M3M2 681 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 ZACNQ401N2 412 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 ARHGAP15Q53QZ3 475 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 PRSS36Q5K4E3 855 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 SV2AQ7L0J3 742 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 LIMS2Q7Z4I7 341 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 DNAJB7Q7Z6W7 309 aaPredicted RBP11.7□□□□□ -0.54
USP49-204ENST00000423567 KBTBD7Q8WVZ9 684 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 PSMG2Q969U7 264 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 PBXIP1Q96AQ6 731 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 MCRS1Q96EZ8 462 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 FUBP3Q96I24 572 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP49-204ENST00000423567 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 GCNAQ96QF7 691 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
USP49-204ENST00000423567 PI4K2AQ9BTU6 479 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 GPR88Q9GZN0 384 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 SLITRK6Q9H5Y7 841 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 MMRN2Q9H8L6 949 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 VRTNQ9H8Y1 702 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 C11orf16Q9NQ32 467 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 FBXL21Q9UKT6 434 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 DUSP12Q9UNI6 340 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 NUMBLQ9Y6R0 609 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 DENND4AQ7Z401 1863 aa11.7□□□□□ -0.54
USP49-204ENST00000423567 C2orf16Q68DN1 1984 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 A8MXQ7 604 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 ANHXE9PGG2 379 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 GOLGA6L22H0YM25 854 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 BIN1O00499 593 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 SOAT2O75908 522 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 HLA-DRAP01903 254 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TRIM49P0CI25 452 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TRIM49CP0CI26 452 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 LMO2P25791 158 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 GTF2H1P32780 548 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 GCLMP48507 274 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 CDR1P51861 262 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 EPHA5P54756 1037 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
USP49-204ENST00000423567 MORC3Q14149 939 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 CAMK4Q16566 473 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 CFAP221Q4G0U5 840 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 ARSIQ5FYB1 569 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TCERG1LQ5VWI1 586 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 KRT39Q6A163 491 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 ANKRD40Q6AI12 368 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 KLHL10Q6JEL2 608 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 SUGP1Q8IWZ8 645 aaKnown RBP11.69□□□□□ -0.54
USP49-204ENST00000423567 SLC44A3Q8N4M1 653 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TTC9BQ8N6N2 239 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TRIML1Q8N9V2 468 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 RSAD2Q8WXG1 361 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TCEAL4Q96EI5 215 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
USP49-204ENST00000423567 LPIN3Q9BQK8 851 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 DNAI2Q9GZS0 605 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 XYLT2Q9H1B5 865 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 DNAJC25Q9H1X3 360 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 ATXN3LQ9H3M9 355 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 MFSD1Q9H3U5 465 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TMEM8AQ9HCN3 771 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TMLHEQ9NVH6 421 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 MAGEC2Q9UBF1 373 aaPredicted RBP11.69□□□□□ -0.54
USP49-204ENST00000423567 HCN4Q9Y3Q4 1203 aa11.69□□□□□ -0.54
USP49-204ENST00000423567 TSC2P49815 1807 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 A0A1W2PRU2 124 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 MYBPHLA2RUH7 354 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 TRIM49BA6NDI0 452 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 HCRTO43612 131 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms