RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SNX25Q9H3E2 840 aa9.27□□□□□ -0.93
MDC1-204ENST00000422266 TASP1Q9H6P5 420 aa9.27□□□□□ -0.93
MDC1-204ENST00000422266 C8orf33Q9H7E9 229 aaPredicted RBP9.27□□□□□ -0.93
MDC1-204ENST00000422266 KIF9Q9HAQ2 790 aa9.27□□□□□ -0.93
MDC1-204ENST00000422266 SIX4Q9UIU6 781 aa9.27□□□□□ -0.93
MDC1-204ENST00000422266 L1RE1Q9UN81 338 aa9.27□□□□□ -0.93
MDC1-204ENST00000422266 SCN1AP35498 2009 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 DOCK6Q96HP0 2047 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 ANK1P16157 1881 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 KMT2EQ8IZD2 1858 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 CACNA1HO95180 2353 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 HEPACAM2A8MVW5 462 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 IKBKBO14920 756 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 TRIM66O15016 1216 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 CLIC2O15247 247 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 MAPK13O15264 365 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 RHOBTB3O94955 611 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 PFKLP17858 780 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 WARSP23381 471 aaKnown RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 ANXA13P27216 316 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 HOXD13P35453 343 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 AVPR1AP37288 418 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 NBL1P41271 181 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 CCR2P41597 374 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 MAGEA11P43364 429 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 RPS9P46781 194 aaKnown RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 PPP3CCP48454 512 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 FCHO2Q0JRZ9 810 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 KCNB1Q14721 858 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 UBXN2BQ14CS0 331 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 ANGPT1Q15389 498 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 NFIL3Q16649 462 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 SOWAHAQ2M3V2 549 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 KMT5BQ4FZB7 885 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 GPR158Q5T848 1215 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 TPRG1Q6ZUI0 275 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 ARID3BQ8IVW6 561 aaPredicted RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 C1orf210Q8IVY1 113 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 HS6ST3Q8IZP7 471 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 CELF5Q8N6W0 485 aaKnown RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 GLIS3Q8NEA6 775 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 CXorf38Q8TB03 319 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 SHKBP1Q8TBC3 707 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 TAF4BQ92750 862 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 HPS3Q969F9 1004 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 CCDC127Q96BQ5 260 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 TRMT2BQ96GJ1 504 aaKnown RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 TNIP3Q96KP6 325 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 TMEM209Q96SK2 561 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 LRRC3Q9BY71 257 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 IMPG2Q9BZV3 1241 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 VRTNQ9H8Y1 702 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 ZNF334Q9HCZ1 680 aaPredicted RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 RMND1Q9NWS8 449 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 MAGEC2Q9UBF1 373 aaPredicted RBP9.26□□□□□ -0.93
MDC1-204ENST00000422266 FBXO4Q9UKT5 387 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 ATP8B3O60423 1300 aa9.26□□□□□ -0.93
MDC1-204ENST00000422266 TCHHQ07283 1943 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 FAM170BA6NMN3 283 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 LAMTOR5O43504 91 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 PI15O43692 258 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 KLRC4O43908 158 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 MOSPD3O75425 235 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 CLSTN1O94985 981 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 ZNF202O95125 648 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 VNN2O95498 520 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 ATF6P18850 670 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 FCARP24071 287 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 GDI1P31150 447 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 GNL1P36915 607 aaPredicted RBP9.25□□□□□ -0.93
MDC1-204ENST00000422266 NDUFA8P51970 172 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 CLDN10P78369 228 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 STK4Q13043 487 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 BIRC3Q13489 604 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 SGSM1Q2NKQ1 1148 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 ZNF528Q3MIS6 628 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 WDR72Q3MJ13 1102 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 FAM171BQ6P995 826 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 VITQ6UXI7 678 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 KRBA2Q6ZNG9 492 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 INTS8Q75QN2 995 aaKnown RBP9.25□□□□□ -0.93
MDC1-204ENST00000422266 GAREM2Q75VX8 874 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 LIMS2Q7Z4I7 341 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 LRRTM3Q86VH5 581 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 CMTM8Q8IZV2 173 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 GUF1Q8N442 669 aaKnown RBP9.25□□□□□ -0.93
MDC1-204ENST00000422266 CCDC150Q8NCX0 1101 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 ZSWIM2Q8NEG5 633 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 OR5B17Q8NGF7 314 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 TMC2Q8TDI7 906 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 BPIFB1Q8TDL5 484 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 PARD3BQ8TEW8 1205 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 NKD2Q969F2 451 aaPredicted RBP9.25□□□□□ -0.93
MDC1-204ENST00000422266 SPATA17Q96L03 361 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 MYRFLQ96LU7 910 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 LPIN3Q9BQK8 851 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 SYT15Q9BQS2 421 aa9.25□□□□□ -0.93
MDC1-204ENST00000422266 PI4K2AQ9BTU6 479 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms