RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DNAI2Q9GZS0 605 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 SDCBP2Q9H190 292 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 CYP3A43Q9HB55 503 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 SAMSN1Q9NSI8 373 aaKnown RBP16.82■□□□□ 0.28
BRAT1-202ENST00000421712 COQ4Q9Y3A0 265 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 UNC80Q8N2C7 3258 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 KCNJ18B7U540 433 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 P4HA2O15460 535 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 SOAT2O75908 522 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 VNN2O95498 520 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 PTPN2P17706 415 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 PTPN1P18031 435 aaKnown RBP16.81■□□□□ 0.28
BRAT1-202ENST00000421712 SSTR3P32745 418 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-202ENST00000421712 ASPAP45381 313 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 NDST1P52848 882 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 KCNJ12Q14500 433 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 TAF12Q16514 161 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 ANO6Q4KMQ2 910 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 MDH1BQ5I0G3 518 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 C4orf50Q6ZRC1 276 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 TTC9BQ8N6N2 239 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 TNIP3Q96KP6 325 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 NECAB3Q96P71 396 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-202ENST00000421712 UHRF1Q96T88 793 aaPredicted RBP16.81■□□□□ 0.28
BRAT1-202ENST00000421712 CRISPLD1Q9H336 500 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 DPEP3Q9H4B8 488 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 PRKAG3Q9UGI9 489 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 YIPF1Q9Y548 306 aa16.81■□□□□ 0.28
BRAT1-202ENST00000421712 DLL1O00548 723 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 PMM2O15305 246 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 TPM2P07951 284 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 CYP2F1P24903 491 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 NTHL1P78549 312 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 MYL5Q02045 173 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 ORC1Q13415 861 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 VEPH1Q14D04 833 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 CCDC142Q17RM4 750 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 ACOT1Q86TX2 421 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 ADHFE1Q8IWW8 467 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 B3GALNT2Q8NCR0 500 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 EHBP1Q8NDI1 1231 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 MYLPFQ96A32 169 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 NT5C1BQ96P26 610 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 CORO1BQ9BR76 489 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 TUBGCP2Q9BSJ2 902 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 MED10Q9BTT4 135 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 BCO2Q9BYV7 579 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 RHOBTB2Q9BYZ6 727 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 WDR6Q9NNW5 1121 aaKnown RBP16.8■□□□□ 0.28
BRAT1-202ENST00000421712 CRTAC1Q9NQ79 661 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 HCFC1R1Q9NWW0 138 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 HSFX1Q9UBD0 423 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 NR2E1Q9Y466 385 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 NME7Q9Y5B8 376 aa16.8■□□□□ 0.28
BRAT1-202ENST00000421712 CLUHO75153 1309 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 HAPLN1P10915 354 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-202ENST00000421712 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
BRAT1-202ENST00000421712 BDNFP23560 247 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 FSHRP23945 695 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 PABPC1LQ4VXU2 614 aaKnown RBP16.79■□□□□ 0.28
BRAT1-202ENST00000421712 VWA3BQ502W6 1294 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 TCP11X2Q5H9J9 407 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 GET4Q7L5D6 327 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-202ENST00000421712 UNC93AQ86WB7 457 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 SCN4BQ8IWT1 228 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 MYCBPAPQ8TBZ2 947 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 FAXDC2Q96IV6 333 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 PKMYT1Q99640 499 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 LPIN3Q9BQK8 851 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 CRACR2AQ9BSW2 395 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 NT5C1AQ9BXI3 368 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 GCNT4Q9P109 453 aa16.79■□□□□ 0.28
BRAT1-202ENST00000421712 DNMT3BQ9UBC3 853 aaKnown RBP16.79■□□□□ 0.28
BRAT1-202ENST00000421712 SPTBN5Q9NRC6 3674 aaKnown RBP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 C2orf16Q68DN1 1984 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 RHOP08100 348 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 MYL4P12829 197 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 GRIK1P39086 918 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 YWHAEP62258 255 aaKnown RBP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ZP2Q05996 745 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 CUL2Q13617 745 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ZNF394Q53GI3 561 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 CYP4A22Q5TCH4 519 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 GBP6Q6ZN66 633 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 PPM1KQ8N3J5 372 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 TTC39CQ8N584 583 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 AOPEPQ8N6M6 819 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 GPR152Q8TDT2 470 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ACSF2Q96CM8 615 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms