RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 RAD23BP54727 409 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 MCCD1P59942 119 aaPredicted RBP11.55□□□□□ -0.56
DDX56-203ENST00000421223 ATP11AP98196 1134 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 BYSLQ13895 437 aaKnown RBP11.55□□□□□ -0.56
DDX56-203ENST00000421223 FAM102AQ5T9C2 384 aaPredicted RBP11.55□□□□□ -0.56
DDX56-203ENST00000421223 EMC10Q5UCC4 262 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 KATNAL2Q8IYT4 538 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 RUNDC3BQ96NL0 473 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 SLITRK1Q96PX8 696 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 LPIN3Q9BQK8 851 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 ELOVL4Q9GZR5 314 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 SNX9Q9Y5X1 595 aa11.55□□□□□ -0.56
DDX56-203ENST00000421223 ASAP2O43150 1006 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 B4GALT4O60513 344 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 TJP3O95049 919 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 NPTXRO95502 500 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 VIMP08670 466 aaKnown RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 CD48P09326 243 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 YWHAEP62258 255 aaKnown RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 PTPN11Q06124 597 aaPredicted RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 GRIK4Q16099 956 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 ZNF484Q5JVG2 852 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 SH3PXD2AQ5TCZ1 1133 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 SPOCD1Q6ZMY3 1216 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 CATSPER4Q7RTX7 472 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 CCDC89Q8N998 374 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 KCTD6Q8NC69 237 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 LRRN4Q8WUT4 740 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 BRI3BPQ8WY22 251 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 PAIP2Q9BPZ3 127 aaKnown RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 TRIM6Q9C030 488 aaPredicted RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 SNTG2Q9NY99 539 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 CNTN6Q9UQ52 1028 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 ZNFX1Q9P2E3 1918 aaKnown RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 POC1B-GALNT4F8VUJ3 575 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 HGSO14964 777 aaPredicted RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 SNAI1O95863 264 aaPredicted RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 SMPD1P17405 629 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 GBP1P32455 592 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 MAGEA9P43362 315 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 NDST1P52848 882 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 NRLP54845 237 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 ENPEPQ07075 957 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 CCNG2Q16589 344 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 QPCTQ16769 361 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 C6orf118Q5T5N4 469 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 MTHFD1LQ6UB35 978 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 OTUD6BQ8N6M0 293 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 GPATCH11Q8N954 259 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 RBM41Q96IZ5 413 aaKnown RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 OSMRQ99650 979 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 SAYSD1Q9NPB0 183 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 INTS9Q9NV88 658 aaKnown RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 DPP3Q9NY33 737 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 SLC12A6Q9UHW9 1150 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 MED7O43513 233 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 CST8O60676 142 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 BANF1O75531 89 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 MICAL2O94851 1124 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 ERBB2P04626 1255 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 PROZP22891 400 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 AKAP5P24588 427 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 YARSP54577 528 aaKnown RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 RAB6CQ53S08 254 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 ACOT1Q86TX2 421 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 RFX6Q8HWS3 928 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 C12orf50Q8NA57 414 aaPredicted RBP11.54□□□□□ -0.56
DDX56-203ENST00000421223 SLC4A11Q8NBS3 891 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 TMEM176AQ96HP8 235 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 RBM15Q96T37 977 aaKnown RBP eCLIP11.54□□□□□ -0.564e-6■■■■□ 20.4
DDX56-203ENST00000421223 TRAIPQ9BWF2 469 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 MIS12Q9H081 205 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 RAB6CQ9H0N0 254 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 WHRNQ9P202 907 aa11.54□□□□□ -0.56
DDX56-203ENST00000421223 A6NNZ2 444 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 H0YHG0 523 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 PPEF2O14830 753 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 MAGEB2O15479 319 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 MEFVO15553 781 aaPredicted RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 IL18RAPO95256 599 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 PDGFRBP09619 1106 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 CETPP11597 493 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 EIF4BP23588 611 aaKnown RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 IL1R2P27930 398 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 KLF1Q13351 362 aaPredicted RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 PTK6Q13882 451 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 ZNF792Q3KQV3 632 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 TUBB8Q3ZCM7 444 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 ILDR2Q71H61 639 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 GPR142Q7Z601 462 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 C3orf20Q8ND61 904 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 GDAP1Q8TB36 358 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 ARHGEF2Q92974 986 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms