RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 FAXCQ5TGI0 409 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 TRAPPC9Q96Q05 1148 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 TMEM237Q96Q45 408 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 RBBP8Q99708 897 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 TMEM79Q9BSE2 394 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 RIC8BQ9NVN3 520 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 DCDC2Q9UHG0 476 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 PRKCBP05771 671 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 BGNP21810 368 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 MAPRE1Q15691 268 aaKnown RBP12.85□□□□□ -0.35
CLCN4-203ENST00000421085 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 CYP4A22Q5TCH4 519 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 ARHGAP27Q6ZUM4 889 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 BBS7Q8IWZ6 715 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 TNIP3Q96KP6 325 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 TMEM8AQ9HCN3 771 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 SESN1Q9Y6P5 492 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 HIST1H2AGP0C0S8 130 aaPredicted RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 HIST1H2ADP20671 130 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 EFNA5P52803 228 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 RBM43Q6ZSC3 357 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 LRRC6Q86X45 466 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 CELF1Q92879 486 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 HIST1H2AHQ96KK5 128 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 HIST1H2AJQ99878 128 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 H2AFJQ9BTM1 129 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 LRCH1Q9Y2L9 728 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 PKP3Q9Y446 797 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 A0A0G2JLW4 131 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 F8VZ95 297 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 SARSP49591 514 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 TRMT5Q32P41 509 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 SGO1Q5FBB7 561 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 BNIPLQ7Z465 357 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 PAIP1Q9H074 479 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 UTP6Q9NYH9 597 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF263O14978 683 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 PON1P27169 355 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 CDC25CP30307 473 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 GTF2H1P32780 548 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 AVPR1AP37288 418 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 RFC5P40937 340 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 JADE3Q92613 823 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 ZKSCAN4Q969J2 545 aaPredicted RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 THUMPD3Q9BV44 507 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 BTBD7Q9P203 1132 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 RAB21Q9UL25 225 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 ROBO2Q9HCK4 1378 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 PTPN7P35236 360 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 GTF2H3Q13889 308 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 ARHGAP17Q68EM7 881 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 PPP2R3CQ969Q6 453 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 DIABLOQ9NR28 239 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 CSTF3Q12996 717 aaKnown RBP12.84□□□□□ -0.35
CLCN4-203ENST00000421085 PDK1Q15118 436 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 ZBTB49Q6ZSB9 765 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF677Q86XU0 584 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 IPMKQ8NFU5 416 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 TMEM143Q96AN5 459 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 IMPAD1Q9NX62 359 aa12.84□□□□□ -0.35
CLCN4-203ENST00000421085 DDX5P17844 614 aaKnown RBP12.83□□□□□ -0.35
CLCN4-203ENST00000421085 GPD1P21695 349 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 OR8H2Q8N162 312 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 C1orf131Q8NDD1 294 aaKnown RBP12.83□□□□□ -0.35
CLCN4-203ENST00000421085 CALML6Q8TD86 181 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 PRCCQ92733 491 aaPredicted RBP12.83□□□□□ -0.35
CLCN4-203ENST00000421085 MIEF2Q96C03 454 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 PAFAH2Q99487 392 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 TRIM62Q9BVG3 475 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 ETAA1Q9NY74 926 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 HOXC10Q9NYD6 342 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.35
CLCN4-203ENST00000421085 EVPLLA8MZ36 301 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 PSTPIP1O43586 416 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 PPIDQ08752 370 aaKnown RBP12.83□□□□□ -0.36
CLCN4-203ENST00000421085 ANGPT1Q15389 498 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 ZNF560Q96MR9 790 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 BTBD10Q9BSF8 475 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 POLIQ9UNA4 740 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 SNX9Q9Y5X1 595 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 E9PBE3 544 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 KLHL41O60662 606 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 TOMM70O94826 608 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 PTGER2P43116 358 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 PLIN5Q00G26 463 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 TRIP4Q15650 581 aaPredicted RBP12.83□□□□□ -0.36
CLCN4-203ENST00000421085 KCTD21Q4G0X4 260 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 PDPK2PQ6A1A2 396 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms