RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 ARHGAP17Q68EM7 881 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 RSPO2Q6UXX9 243 aaPredicted RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 ZNF677Q86XU0 584 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 TMEM139Q8IV31 216 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 C12orf29Q8N999 325 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 B3GALNT2Q8NCR0 500 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 EPS8L1Q8TE68 723 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 TIFAQ96CG3 184 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 PKMYT1Q99640 499 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 AGPAT1Q99943 283 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 CLSTN3Q9BQT9 956 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 SYT11Q9BT88 431 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 C11orf84Q9BUA3 381 aaPredicted RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 CERS4Q9HA82 394 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 NOCTQ9UK39 431 aaKnown RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 GTF3C4Q9UKN8 822 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 SSX2IPQ9Y2D8 614 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 C2CD2LO14523 706 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 GRM6O15303 877 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 THAP12O43422 761 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 CXCL14O95715 111 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 URODP06132 367 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 MMEP08473 750 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 OR4Q2P0C623 313 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 TNFAIP3P21580 790 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 PDE6CP51160 858 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 TSPY1Q01534 308 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 FMO1Q01740 532 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 CDR2Q01850 454 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 CAMK1Q14012 370 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 PTPN14Q15678 1187 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 CCDC142Q17RM4 750 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 TDRD12Q587J7 1177 aaKnown RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 MDH1BQ5I0G3 518 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 PPP1R26Q5T8A7 1209 aaPredicted RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 TAF3Q5VWG9 929 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 TMC7Q7Z402 723 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 DCP1BQ8IZD4 617 aaKnown RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 MYCBPAPQ8TBZ2 947 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 AUTS2Q8WXX7 1259 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 CYFIP2Q96F07 1278 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 NHEJ1Q9H9Q4 299 aaPredicted RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 RXFP1Q9HBX9 757 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.29
TMEM53-206ENST00000420706 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 CEP290O15078 2479 aa13.27□□□□□ -0.29
TMEM53-206ENST00000420706 O00370 1275 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 FSCN2O14926 492 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 ADAM12O43184 909 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 MED7O43513 233 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 CFHP08603 1231 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
TMEM53-206ENST00000420706 SSTR3P32745 418 aaPredicted RBP13.26□□□□□ -0.29
TMEM53-206ENST00000420706 GPR17Q13304 367 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 STILQ15468 1287 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 ASTE1Q2TB18 679 aaPredicted RBP13.26□□□□□ -0.29
TMEM53-206ENST00000420706 SLC8B1Q6J4K2 584 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 LCLAT1Q6UWP7 414 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 PAQR9Q6ZVX9 377 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 SLC30A5Q8TAD4 765 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 ARNTL2Q8WYA1 636 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 PCED1BQ96HM7 432 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 ZNF830Q96NB3 372 aaPredicted RBP13.26□□□□□ -0.29
TMEM53-206ENST00000420706 PCDHB18PQ96TA0 734 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 HNRNPABQ99729 332 aaKnown RBP13.26□□□□□ -0.29
TMEM53-206ENST00000420706 B3GNT5Q9BYG0 378 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 TLR9Q9NR96 1032 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.29
TMEM53-206ENST00000420706 FAM49BQ9NUQ9 324 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 FNIP2Q9P278 1114 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 IRAK3Q9Y616 596 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 CDY1Q9Y6F8 540 aa13.26□□□□□ -0.29
TMEM53-206ENST00000420706 EPOPA6NHQ4 379 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 DDX3XO00571 662 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■■■□□ 18.6
TMEM53-206ENST00000420706 MICAL2O94851 1124 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 CCDC130P13994 396 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 ADORA2BP29275 332 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 OR1D2P34982 312 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 ARPP19P56211 112 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 CCZ1BP86790 482 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 CCZ1P86791 482 aaPredicted RBP13.25□□□□□ -0.29
TMEM53-206ENST00000420706 BMS1Q14692 1282 aaKnown RBP13.25□□□□□ -0.29
TMEM53-206ENST00000420706 MAPRE1Q15691 268 aaKnown RBP13.25□□□□□ -0.29
TMEM53-206ENST00000420706 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 FUKQ8N0W3 1084 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms