RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 N4BP2L2Q92802 583 aaPredicted RBP13.67□□□□□ -0.22
LINC00642-201ENST00000419459 APBB2Q92870 758 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 LSM14BQ9BX40 385 aaKnown RBP13.67□□□□□ -0.22
LINC00642-201ENST00000419459 ASB7Q9H672 318 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 PLAAQ9Y263 795 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 PCDHGC5Q9Y5F6 944 aa13.67□□□□□ -0.22
LINC00642-201ENST00000419459 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
LINC00642-201ENST00000419459 PPEF2O14830 753 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 DNAJC8O75937 253 aaPredicted RBP13.66□□□□□ -0.22
LINC00642-201ENST00000419459 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
LINC00642-201ENST00000419459 IKBKEQ14164 716 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 MAATS1Q7Z4T9 603 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 MRPL10Q7Z7H8 261 aaKnown RBP13.66□□□□□ -0.22
LINC00642-201ENST00000419459 CACNA2D3Q8IZS8 1091 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 FBXL13Q8NEE6 735 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 ANKRD36BP1Q96IX9 119 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 HINFPQ9BQA5 517 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 PAAF1Q9BRP4 392 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 NLRC4Q9NPP4 1024 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 SIX4Q9UIU6 781 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 TMEM59LQ9UK28 342 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 AJAP1Q9UKB5 411 aaPredicted RBP13.66□□□□□ -0.22
LINC00642-201ENST00000419459 LRRC53A6NM62 1247 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 NOL4O94818 638 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 HLA-DRAP01903 254 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 CALRP27797 417 aaKnown RBP13.66□□□□□ -0.22
LINC00642-201ENST00000419459 NCOA4Q13772 614 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 NAB2Q15742 525 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 EPC2Q52LR7 807 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 FMNL3Q8IVF7 1028 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 BAP1Q92560 729 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 CALR3Q96L12 384 aaKnown RBP13.66□□□□□ -0.22
LINC00642-201ENST00000419459 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 PLEKHA5Q9HAU0 1116 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 RAB20Q9NX57 234 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 C2CD2Q9Y426 696 aa13.66□□□□□ -0.22
LINC00642-201ENST00000419459 BTNL10A8MVZ5 291 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 NCK2O43639 380 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 B4GALT3O60512 393 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 POLR2BP30876 1174 aaKnown RBP13.65□□□□□ -0.22
LINC00642-201ENST00000419459 SLC8A3P57103 927 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 MCCD1P59942 119 aaPredicted RBP13.65□□□□□ -0.22
LINC00642-201ENST00000419459 MYL6P60660 151 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 SATB1Q01826 763 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 FPGSQ05932 587 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 ZBTB6Q15916 424 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 MEI1Q5TIA1 1274 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 PHLDB3Q6NSJ2 640 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 ZNF365Q70YC5 407 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 ARHGEF19Q8IW93 802 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 HACE1Q8IYU2 909 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 KAT5Q92993 513 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 PPP1R10Q96QC0 940 aaKnown RBP13.65□□□□□ -0.22
LINC00642-201ENST00000419459 PSMB7Q99436 277 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 INTS2Q9H0H0 1204 aaKnown RBP13.65□□□□□ -0.22
LINC00642-201ENST00000419459 CNOT10Q9H9A5 744 aaKnown RBP13.65□□□□□ -0.22
LINC00642-201ENST00000419459 SIX2Q9NPC8 291 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 DPP3Q9NY33 737 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 EHD2Q9NZN4 543 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 SALL4Q9UJQ4 1053 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 PCDHB7Q9Y5E2 793 aa13.65□□□□□ -0.22
LINC00642-201ENST00000419459 CASTOR2A6NHX0 329 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 ZBBXA8MT70 800 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 F8W810 466 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 H0YGN5 161 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 TNNC2P02585 160 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 SERPING1P05155 500 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 GTF2H1P32780 548 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 RFC2P35250 354 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 FAM189BP81408 668 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 SURF1Q15526 300 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 PAN2Q504Q3 1202 aaKnown RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 GKAP1Q5VSY0 366 aaPredicted RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 DPY19L2P1Q6NXN4 242 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 CRIPAKQ8N1N5 446 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 TATDN2Q93075 761 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 PGBD4Q96DM1 585 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 KRT12Q99456 494 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 C1orf112Q9NSG2 853 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 TMEM161AQ9NX61 479 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 SMARCAL1Q9NZC9 954 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 CXXC1Q9P0U4 656 aaPredicted RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 CEP72Q9P209 647 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 COQ4Q9Y3A0 265 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 NFS1Q9Y697 457 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 ATP8B3O60423 1300 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 GTPBP10A4D1E9 387 aaKnown RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 MGRN1O60291 552 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms