RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SERINC3Q13530 473 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 CAMK1Q14012 370 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 TMEM119Q4V9L6 283 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 TCEAL5Q5H9L2 206 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 HYIQ5T013 277 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 FAM173BQ6P4H8 233 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 NOTUMQ6P988 496 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 GLB1LQ6UWU2 654 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 UNC5AQ6ZN44 842 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 ZBTB8OSQ8IWT0 167 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 THNSL1Q8IYQ7 743 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 CELF2-AS1Q8N7Q2 184 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 DEPTORQ8TB45 409 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 SPPL3Q8TCT6 385 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 POF1BQ8WVV4 589 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 RSPH1Q8WYR4 309 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 KIFAP3Q92845 792 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 PGBD4Q96DM1 585 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 CPB2Q96IY4 423 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 ZNF558Q96NG5 402 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 ASB2Q96Q27 587 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 KIFC3Q9BVG8 833 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 SSBP4Q9BWG4 385 aaPredicted RBP7.62□□□□□ -1.19
HMGN1-205ENST00000419378 EIF2AQ9BY44 585 aaKnown RBP7.62□□□□□ -1.19
HMGN1-205ENST00000419378 NT5C3AQ9H0P0 336 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 C2orf40Q9H1Z8 148 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 KCNF1Q9H3M0 494 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 ST7Q9NRC1 585 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 PCDHB12Q9Y5F1 795 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 CLIC4Q9Y696 253 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 A0A1B0GUA9 196 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 FAM95CA0A1B0GW59 222 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 RGS13O14921 159 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 SLC26A4O43511 780 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 STX6O43752 255 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 HIP1RO75146 1068 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 OFD1O75665 1012 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 LRIG2O94898 1065 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 NCLP19338 710 aaKnown RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 PPM1AP35813 382 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 LONP1P36776 959 aaKnown RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 KCNQ1P51787 676 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 UBE3AQ05086 875 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 GRIN1Q05586 938 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 NCBP1Q09161 790 aaKnown RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 MAPK7Q13164 816 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 MAP7Q14244 749 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 PPP2R5AQ15172 486 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 PTPAQ15257 358 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 NOMO2Q5JPE7 1267 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 RINT1Q6NUQ1 792 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 KCNT2Q6UVM3 1135 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 C1orf186Q6ZWK4 172 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 MRPL10Q7Z7H8 261 aaKnown RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 CABP7Q86V35 215 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 CDR2LQ86X02 465 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 DAW1Q8N136 415 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 SLC39A11Q8N1S5 342 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 BAHD1Q8TBE0 780 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 MICAL1Q8TDZ2 1067 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 CDK5RAP3Q96JB5 506 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 IFT74Q96LB3 600 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 AK8Q96MA6 479 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 PLIN2Q99541 437 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 CCDC113Q9H0I3 377 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 CSRNP2Q9H175 543 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 FZD8Q9H461 694 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 NXF3Q9H4D5 531 aaKnown RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 UBE2ZQ9H832 354 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 RSAD1Q9HA92 442 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 POLD4Q9HCU8 107 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 TBC1D13Q9NVG8 400 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 PRMT7Q9NVM4 692 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 FBXO2Q9UK22 296 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-205ENST00000419378 IPPQ9Y573 584 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 NCOR1O75376 2440 aa7.61□□□□□ -1.19
HMGN1-205ENST00000419378 MYH15Q9Y2K3 1946 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 PHLPP2Q6ZVD8 1323 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 BDP1A6H8Y1 2624 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 B4GALT3O60512 393 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 ZC3H11AO75152 810 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 NPTXRO95502 500 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 EDN1P05305 212 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 PRKCBP05771 671 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 HSP90AA1P07900 732 aaKnown RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 PLA2G4BP0C869 781 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 ITGA4P13612 1032 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 KCNA5P22460 613 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 MARCKSP29966 332 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 MLH1P40692 756 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 UBA7P41226 1012 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 GSK3AP49840 483 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 EFNA5P52803 228 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 SLC12A3P55017 1021 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 BCAR1P56945 870 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 CEBPZQ03701 1054 aaKnown RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 HYAL1Q12794 435 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 DMP1Q13316 513 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 CDK5R2Q13319 367 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms