RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PCDHB5Q9Y5E4 795 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 OBSL1O75147 1896 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 ZNF197O14709 1029 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 ECI2O75521 394 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 MYL4P12829 197 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 CD44P16070 742 aaKnown RBP22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 ALDH1A3P47895 512 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 TSPY1Q01534 308 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 TEAD2Q15562 447 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 WDR72Q3MJ13 1102 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 MGAT5BQ3V5L5 792 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 CFAP221Q4G0U5 840 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 STXBP5Q5T5C0 1151 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 CYP4A22Q5TCH4 519 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 MTSS1LQ765P7 747 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 STKLD1Q8NE28 680 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 KXD1Q9BQD3 176 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 TRPV4Q9HBA0 871 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 RMND1Q9NWS8 449 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 WNT16Q9UBV4 365 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 MAN1B1Q9UKM7 699 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 CDH9Q9ULB4 789 aa22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 ARIH1Q9Y4X5 557 aaPredicted RBP22.08■■□□□ 1.13
PKNOX1-202ENST00000418336 GREB1Q4ZG55 1949 aa22.08■■□□□ 1.12
PKNOX1-202ENST00000418336 DENND4CQ5VZ89 1909 aa22.08■■□□□ 1.12
PKNOX1-202ENST00000418336 A0A1W2PRU2 124 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 LRRN2O75325 713 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 TRIM49P0CI25 452 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 TRIM49CP0CI26 452 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 CYP2F1P24903 491 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 VAMP7P51809 220 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 PSMC1P62191 440 aaKnown RBP22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 GPC5P78333 572 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 ADAM9Q13443 819 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 NCOA4Q13772 614 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 NFE2Q16621 373 aaPredicted RBP22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 ANKRD40Q6AI12 368 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 GPR152Q8TDT2 470 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 SMARCE1Q969G3 411 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 RSPRY1Q96DX4 576 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 EEF2KMTQ96G04 330 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 SYT15Q9BQS2 421 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 DPEP3Q9H4B8 488 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 SMYD3Q9H7B4 428 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 FRMD4BQ9Y2L6 1034 aa22.07■■□□□ 1.12
PKNOX1-202ENST00000418336 SHISA7A6NL88 538 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 CFHP08603 1231 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 PCSK1P29120 753 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 SDHAF4Q5VUM1 108 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 INTS8Q75QN2 995 aaKnown RBP22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 FAM186BQ8IYM0 893 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 GIPC2Q8TF65 315 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 SYAP1Q96A49 352 aaPredicted RBP22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 ELSPBP1Q96BH3 223 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 CCDC34Q96HJ3 373 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 FUBP3Q96I24 572 aaKnown RBP eCLIP22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 MMS19Q96T76 1030 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 TMEM30AQ9NV96 361 aa22.06■■□□□ 1.12
PKNOX1-202ENST00000418336 NUP210Q8TEM1 1887 aaPredicted RBP22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 TRIM49BA6NDI0 452 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 TADA3O75528 432 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 SMC2O95347 1197 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 ASS1P00966 412 aaKnown RBP22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 PSMC2P35998 433 aaKnown RBP22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 MAGEA11P43364 429 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 TRPC3Q13507 836 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 MORC3Q14149 939 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 DDR2Q16832 855 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 CLEC17AQ6ZS10 378 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 TMEM105Q8N8V8 129 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 MYLPFQ96A32 169 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 APOBEC3GQ9HC16 384 aaKnown RBP22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 DMDP11532 3685 aa22.05■■□□□ 1.12
PKNOX1-202ENST00000418336 PPP1R3GB7ZBB8 358 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 NOL4O94818 638 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 F11P03951 625 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 PDGFRBP09619 1106 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 AVPR2P30518 371 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 ASPAP45381 313 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 RAP1GAPP47736 663 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 GCLMP48507 274 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 CDH8P55286 799 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 BIRC3Q13489 604 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 ZNF699Q32M78 642 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 SPOPLQ6IQ16 392 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 ITIH5Q86UX2 942 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 SIX5Q8N196 739 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 MYCBPAPQ8TBZ2 947 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 TAS1R2Q8TE23 839 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 SMARCD2Q92925 531 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 PCED1BQ96HM7 432 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 LRRC3BQ96PB8 259 aa22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 NXF1Q9UBU9 619 aaKnown RBP22.04■■□□□ 1.12
PKNOX1-202ENST00000418336 KIF26AQ9ULI4 1882 aaPredicted RBP22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 KINO60870 393 aaKnown RBP22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 PHACTR2O75167 634 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 HLA-DRAP01903 254 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 RPL13P26373 211 aaKnown RBP22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 GABRR2P28476 465 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 WEE1P30291 646 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms