RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 METTL5Q9NRN9 209 aaKnown RBP12.52□□□□□ -0.41
LIMK1-202ENST00000418310 RNF19AQ9NV58 838 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 CHKBQ9Y259 395 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 CNTNAP2Q9UHC6 1331 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 hCG_1818297A0A087WSY0 165 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 A0A0B4J269 797 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 CFAP73A6NFT4 308 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 DKC1O60832 514 aaKnown RBP eCLIP12.52□□□□□ -0.41
LIMK1-202ENST00000418310 PSMC1P62191 440 aaKnown RBP12.52□□□□□ -0.41
LIMK1-202ENST00000418310 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 EAPPQ56P03 285 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-202ENST00000418310 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.41
LIMK1-202ENST00000418310 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 TMEM35BQ8NCS4 154 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 BBOF1Q8ND07 529 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 LRRC37BQ96QE4 947 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 TEX13BQ9BXU2 312 aa12.52□□□□□ -0.41
LIMK1-202ENST00000418310 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
LIMK1-202ENST00000418310 AVILO75366 819 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 ZBTB7AO95365 584 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 PTPRAP18433 802 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 VCPP55072 806 aaKnown RBP12.51□□□□□ -0.41
LIMK1-202ENST00000418310 TGFB2P61812 414 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 PTPN20Q4JDL3 420 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 TFDP3Q5H9I0 405 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 WLSQ5T9L3 541 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 SH3PXD2AQ5TCZ1 1133 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 FKBP1CQ5VVH2 108 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 RFX8Q6ZV50 586 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 NCAPG2Q86XI2 1143 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 PHF13Q86YI8 300 aaPredicted RBP12.51□□□□□ -0.41
LIMK1-202ENST00000418310 PALM2Q8IXS6 379 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 YY1AP1Q9H869 796 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 SLC17A7Q9P2U7 560 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 AFG3L2Q9Y4W6 797 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 ATP2A1O14983 1001 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 ASMTLO95671 621 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 KRT3P12035 628 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 KCNA3P22001 575 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 EPHB2P29323 1055 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 GPX6P59796 221 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 ATP11AP98196 1134 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
LIMK1-202ENST00000418310 STXBP2Q15833 593 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 GALNTL6Q49A17 601 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 UNC45BQ8IWX7 931 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 UBA3Q8TBC4 463 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 TTC17Q96AE7 1141 aa12.51□□□□□ -0.41
LIMK1-202ENST00000418310 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 TBXAS1P24557 533 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 NAMPTP43490 491 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 TRIM72Q6ZMU5 477 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 CTAGE3PQ8IX95 158 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 GPATCH2LQ9NWQ4 482 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 GEMIN8Q9NWZ8 242 aaKnown RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 CYTH4Q9UIA0 394 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 KIAA1217Q5T5P2 1943 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 TCF7P36402 384 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 CDKN2BP42772 138 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 YWHAGP61981 247 aaKnown RBP eCLIP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 SCYL2Q6P3W7 929 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 C1orf228Q6PIY5 440 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 KCTD6Q8NC69 237 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 LGALS13Q9UHV8 139 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 TMEM63AO94886 807 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 CXCL8P10145 99 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 STAT5BP51692 787 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 MAPK6Q16659 721 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 RNASEH2BQ5TBB1 312 aaKnown RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 SLFN12LQ6IEE8 588 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 MTDHQ86UE4 582 aaKnown RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 TCP10LQ8TDR4 215 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 UTP4Q969X6 686 aaKnown RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 CFAP36Q96G28 342 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 PAFAH2Q99487 392 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 NKX1-2Q9UD57 310 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-202ENST00000418310 PRKAG3Q9UGI9 489 aa12.5□□□□□ -0.41
LIMK1-202ENST00000418310 CLUHO75153 1309 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 FAM155BO75949 473 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 ASS1P00966 412 aaKnown RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 CALB1P05937 261 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 PGK2P07205 417 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 ZNF268Q14587 947 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-202ENST00000418310 MDH1BQ5I0G3 518 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 EEF1DP3Q658K8 133 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 OTOAQ7RTW8 1153 aa12.49□□□□□ -0.41
LIMK1-202ENST00000418310 RDM1Q8NG50 284 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms