RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 KLK14Q9P0G3 267 aa17.76■□□□□ 0.43
SSBP3-205ENST00000417664 FAM187AA6NFU0 413 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 BHMG1C9JSJ3 638 aaPredicted RBP17.75■□□□□ 0.43
SSBP3-205ENST00000417664 PPEF2O14830 753 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 FSCN2O14926 492 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 PHF2O75151 1096 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 SASH3O75995 380 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 CTSHP09668 335 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 KRT3P12035 628 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 CETN2P41208 172 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 PDCLQ13371 301 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 CASP8Q14790 479 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 ACAP1Q15027 740 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 CYP1B1Q16678 543 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 SOWAHAQ2M3V2 549 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 LLGL2Q6P1M3 1020 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 MRPL10Q7Z7H8 261 aaKnown RBP17.75■□□□□ 0.43
SSBP3-205ENST00000417664 GLT1D1Q96MS3 346 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 MCEEQ96PE7 176 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 MRPL45Q9BRJ2 306 aaKnown RBP17.75■□□□□ 0.43
SSBP3-205ENST00000417664 NOD1Q9Y239 953 aa17.75■□□□□ 0.43
SSBP3-205ENST00000417664 FKTNO75072 461 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-205ENST00000417664 SKIP12755 728 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 PSMC1P62191 440 aaKnown RBP17.74■□□□□ 0.43
SSBP3-205ENST00000417664 RPL7AP62424 266 aaKnown RBP17.74■□□□□ 0.43
SSBP3-205ENST00000417664 ARHGAP17Q68EM7 881 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 XYLT1Q86Y38 959 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 CRYBG2Q8N1P7 616 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 TOP6BLQ8N6T0 577 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 ARRDC4Q8NCT1 418 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 APPL2Q8NEU8 664 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 EXD1Q8NHP7 514 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 STK32AQ8WU08 396 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 SEC14L1Q92503 715 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 CAVIN3Q969G5 261 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 MCRS1Q96EZ8 462 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 CPXM1Q96SM3 734 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 SEZ6LQ9BYH1 1024 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 RAB17Q9H0T7 212 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 PCYOX1Q9UHG3 505 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 CYTH4Q9UIA0 394 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 TSPAN16Q9UKR8 245 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 UTP11Q9Y3A2 253 aaKnown RBP17.74■□□□□ 0.43
SSBP3-205ENST00000417664 PTGESO14684 152 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 HUS1O60921 280 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 MYBL2P10244 700 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 ORC1Q13415 861 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 CPNE8Q86YQ8 564 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 C12orf50Q8NA57 414 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-205ENST00000417664 OR6B3Q8NGW1 331 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 HMX1Q9NP08 348 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-205ENST00000417664 UBN1Q9NPG3 1134 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 HOMER3Q9NSC5 361 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 SAGE1Q9NXZ1 904 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 HESX1Q9UBX0 185 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 AMACRQ9UHK6 382 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 RASAL2Q9UJF2 1139 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 PADI3Q9ULW8 664 aa17.74■□□□□ 0.43
SSBP3-205ENST00000417664 A8MXQ7 604 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 THP07101 528 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 PAX3P23760 479 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 FNTAP49354 379 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 LILRA4P59901 499 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 SOX4Q06945 474 aaPredicted RBP17.73■□□□□ 0.43
SSBP3-205ENST00000417664 TRIM71Q2Q1W2 868 aaKnown RBP17.73■□□□□ 0.43
SSBP3-205ENST00000417664 PKDCCQ504Y2 493 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 CYP4A22Q5TCH4 519 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 POLNQ7Z5Q5 900 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 PRELID2Q8N945 189 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 RBM41Q96IZ5 413 aaKnown RBP17.73■□□□□ 0.43
SSBP3-205ENST00000417664 TNIP3Q96KP6 325 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 SNX25Q9H3E2 840 aa17.73■□□□□ 0.43
SSBP3-205ENST00000417664 AGO3Q9H9G7 860 aaKnown RBP17.73■□□□□ 0.43
SSBP3-205ENST00000417664 PODXLO00592 558 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 INHAP05111 366 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 WARSP23381 471 aaKnown RBP17.72■□□□□ 0.43
SSBP3-205ENST00000417664 GNL1P36915 607 aaPredicted RBP17.72■□□□□ 0.43
SSBP3-205ENST00000417664 VEGFBP49765 207 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 COPS2P61201 443 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 DR1Q01658 176 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 DSC3Q14574 896 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 AADACL2Q6P093 401 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 ACOT1Q86TX2 421 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 RCOR2Q8IZ40 523 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 MAGOHBQ96A72 148 aaKnown RBP17.72■□□□□ 0.43
SSBP3-205ENST00000417664 PGBD4Q96DM1 585 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 LRRC19Q9H756 370 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 FAM114A2Q9NRY5 505 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 DDX56Q9NY93 547 aaKnown RBP17.72■□□□□ 0.43
SSBP3-205ENST00000417664 NR2E1Q9Y466 385 aa17.72■□□□□ 0.43
SSBP3-205ENST00000417664 A0A0U1RQF3 1178 aa17.71■□□□□ 0.43
SSBP3-205ENST00000417664 ERBB2P04626 1255 aa17.71■□□□□ 0.43
SSBP3-205ENST00000417664 GBP1P32455 592 aa17.71■□□□□ 0.43
SSBP3-205ENST00000417664 RPL9P32969 192 aaKnown RBP17.71■□□□□ 0.43
SSBP3-205ENST00000417664 TNNT3P45378 269 aaPredicted RBP17.71■□□□□ 0.43
SSBP3-205ENST00000417664 PLA2G4AP47712 749 aa17.71■□□□□ 0.43
SSBP3-205ENST00000417664 CARSP49589 748 aaKnown RBP17.71■□□□□ 0.43
SSBP3-205ENST00000417664 DRG2P55039 364 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms