RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 FMR1NBQ8N0W7 255 aaPredicted RBP16.74■□□□□ 0.27
ITGB1-204ENST00000417122 TRPV4Q9HBA0 871 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 ABCB6Q9NP58 842 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 CDH9Q9ULB4 789 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 MAPK8IP1Q9UQF2 711 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 TRAF3IP3Q9Y228 551 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 ZDBF2Q9HCK1 2354 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 ATP2C2O75185 946 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 STAU1O95793 577 aaKnown RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 PSMC3P17980 439 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 CYP2F1P24903 491 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 CDC25CP30307 473 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 ATICP31939 592 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 VIPR2P41587 438 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 GPR15P49685 360 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 MYL6P60660 151 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 RPL10AP62906 217 aaKnown RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 TNNC1P63316 161 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 CLDN10P78369 228 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 PRKCQQ04759 706 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 BIRC3Q13489 604 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 GRM2Q14416 872 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 MLF2Q15773 248 aaPredicted RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 CCDC142Q17RM4 750 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 ARHGAP15Q53QZ3 475 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 STXBP5Q5T5C0 1151 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 CEP135Q66GS9 1140 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 FAM171BQ6P995 826 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 VITQ6UXI7 678 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 GUF1Q8N442 669 aaKnown RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 SYAP1Q96A49 352 aaPredicted RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 SYT15Q9BQS2 421 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 TRMT61BQ9BVS5 477 aaKnown RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 IRF2BPLQ9H1B7 796 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 IL21Q9HBE4 155 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 FRMD4BQ9Y2L6 1034 aa16.73■□□□□ 0.27
ITGB1-204ENST00000417122 NUP210Q8TEM1 1887 aaPredicted RBP16.73■□□□□ 0.27
ITGB1-204ENST00000417122 HEPACAM2A8MVW5 462 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 TACC1O75410 805 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 C4BPAP04003 597 aaKnown RBP16.72■□□□□ 0.27
ITGB1-204ENST00000417122 FAM163BP0C2L3 166 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 CSH1P0DML2 217 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 CSH2P0DML3 217 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 PSMC1P62191 440 aaKnown RBP16.72■□□□□ 0.27
ITGB1-204ENST00000417122 DLG4P78352 724 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 CYP4F8P98187 520 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 PNOCQ13519 176 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 NFIL3Q16649 462 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 CFAP221Q4G0U5 840 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 GPR158Q5T848 1215 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 SDHAF4Q5VUM1 108 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 TDRD10Q5VZ19 366 aaKnown RBP16.72■□□□□ 0.27
ITGB1-204ENST00000417122 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 CCDC105Q8IYK2 499 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 DEPDC1BQ8WUY9 529 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 E2F7Q96AV8 911 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 FUBP3Q96I24 572 aaKnown RBP eCLIP16.72■□□□□ 0.27
ITGB1-204ENST00000417122 GCNAQ96QF7 691 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 XYLT2Q9H1B5 865 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 SNX25Q9H3E2 840 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 MAGEC2Q9UBF1 373 aaPredicted RBP16.72■□□□□ 0.27
ITGB1-204ENST00000417122 NXF1Q9UBU9 619 aaKnown RBP16.72■□□□□ 0.27
ITGB1-204ENST00000417122 SIT1Q9Y3P8 196 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 DENND4CQ5VZ89 1909 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 COL4A3Q01955 1670 aa16.72■□□□□ 0.27
ITGB1-204ENST00000417122 KANSL1LA0AUZ9 987 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 H0Y858 1186 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 MAPK13O15264 365 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 CLSTN1O94985 981 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 PDGFRBP09619 1106 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 HMGA1P17096 107 aaKnown RBP16.71■□□□□ 0.27
ITGB1-204ENST00000417122 NR2F2P24468 414 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 GNL1P36915 607 aaPredicted RBP16.71■□□□□ 0.27
ITGB1-204ENST00000417122 FAM160A1Q05DH4 1040 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 MAPRE1Q15691 268 aaKnown RBP16.71■□□□□ 0.27
ITGB1-204ENST00000417122 DDR2Q16832 855 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 ARID3BQ8IVW6 561 aaPredicted RBP16.71■□□□□ 0.27
ITGB1-204ENST00000417122 MFSD6LQ8IWD5 586 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 DTWD2Q8NBA8 298 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 ENGASEQ8NFI3 743 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 PJA1Q8NG27 643 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 OR6B3Q8NGW1 331 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 TMC2Q8TDI7 906 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 ATOH1Q92858 354 aaPredicted RBP16.71■□□□□ 0.27
ITGB1-204ENST00000417122 DNASE1L2Q92874 299 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 IRF7Q92985 503 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 MYLPFQ96A32 169 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
ITGB1-204ENST00000417122 FOXQ1Q9C009 403 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 TASP1Q9H6P5 420 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 VRTNQ9H8Y1 702 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 CRTAC1Q9NQ79 661 aa16.71■□□□□ 0.27
ITGB1-204ENST00000417122 MAGED2Q9UNF1 606 aaPredicted RBP16.71■□□□□ 0.27
ITGB1-204ENST00000417122 WDFY4Q6ZS81 3184 aa16.71■□□□□ 0.26
ITGB1-204ENST00000417122 NCANO14594 1321 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 MIA3Q5JRA6 1907 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms