RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
LINC00339-202ENST00000416769 MYCT1Q8N699 235 aa13.94□□□□□ -0.18
LINC00339-202ENST00000416769 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
LINC00339-202ENST00000416769 USP13Q92995 863 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-202ENST00000416769 HHIPQ96QV1 700 aa13.94□□□□□ -0.18
LINC00339-202ENST00000416769 FAM83CQ9BQN1 747 aa13.94□□□□□ -0.18
LINC00339-202ENST00000416769 PYM1Q9BRP8 204 aaKnown RBP13.94□□□□□ -0.18
LINC00339-202ENST00000416769 ZHX3Q9H4I2 956 aa13.94□□□□□ -0.18
LINC00339-202ENST00000416769 ABI2Q9NYB9 513 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-202ENST00000416769 STK24Q9Y6E0 443 aa13.94□□□□□ -0.18
LINC00339-202ENST00000416769 CYB561D2O14569 222 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 TM4SF5O14894 197 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 SPTLC2O15270 562 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 RNF40O75150 1001 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 PPP6R2O75170 966 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 CYP11A1P05108 521 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 HAPLN1P10915 354 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-202ENST00000416769 TMEM132DQ14C87 1099 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
LINC00339-202ENST00000416769 ITPRIPL2Q3MIP1 535 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 AASDHQ4L235 1098 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-202ENST00000416769 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 TMEM196Q5HYL7 178 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 ARMCX5Q6P1M9 558 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 CMTM8Q8IZV2 173 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 TTC16Q8NEE8 873 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 MSANTD3Q96H12 275 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 SLC22A12Q96S37 553 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 ASB3Q9Y575 518 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 LAMA1P25391 3075 aa13.93□□□□□ -0.18
LINC00339-202ENST00000416769 IGF2RP11717 2491 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 KIAA1549LQ6ZVL6 1849 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-202ENST00000416769 ABCB7O75027 752 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 RPP40O75818 363 aaKnown RBP13.92□□□□□ -0.18
LINC00339-202ENST00000416769 FAM13AO94988 1023 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 F11P03951 625 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 PLCG1P19174 1290 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 ZNF131P52739 623 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 NLRP12P59046 1061 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 CRELD2Q6UXH1 353 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-202ENST00000416769 GAB3Q8WWW8 586 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 SPATA32Q96LK8 384 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 OBP2AQ9NY56 170 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 LARSQ9P2J5 1176 aaKnown RBP13.92□□□□□ -0.18
LINC00339-202ENST00000416769 MAGED2Q9UNF1 606 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-202ENST00000416769 INVSQ9Y283 1065 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
LINC00339-202ENST00000416769 GON4LQ3T8J9 2241 aa13.92□□□□□ -0.18
LINC00339-202ENST00000416769 TRAK2O60296 914 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 EPN2O95208 641 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 ACAT1P24752 427 aaKnown RBP13.91□□□□□ -0.18
LINC00339-202ENST00000416769 PMLP29590 882 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 HOXA6P31267 233 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 CNR2P34972 360 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 KCNA1Q09470 495 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 RUNX3Q13761 415 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 USP49Q70CQ1 688 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 ITIH5Q86UX2 942 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 OSTM1Q86WC4 334 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 LEO1Q8WVC0 666 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-202ENST00000416769 PI4K2AQ9BTU6 479 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 OXCT2Q9BYC2 517 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-202ENST00000416769 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 ANAPC1Q9H1A4 1944 aa13.91□□□□□ -0.18
LINC00339-202ENST00000416769 GIPC1O14908 333 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 XPOTO43592 962 aaKnown RBP13.9□□□□□ -0.18
LINC00339-202ENST00000416769 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 CDC25CP30307 473 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 ADSSP30520 456 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 GALK1P51570 392 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 VEPH1Q14D04 833 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 DDR2Q16832 855 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 STPG1Q5TH74 334 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 ADALQ6DHV7 355 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 IL31Q6EBC2 164 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 KCNN1Q92952 543 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 GBP4Q96PP9 640 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 CYP2S1Q96SQ9 504 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 KCND2Q9NZV8 630 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 FBXO2Q9UK22 296 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-202ENST00000416769 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 WNT6Q9Y6F9 365 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 NUP205Q92621 2012 aa13.9□□□□□ -0.18
LINC00339-202ENST00000416769 CACNA1EQ15878 2313 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 TRDMT1O14717 391 aaKnown RBP13.89□□□□□ -0.19
LINC00339-202ENST00000416769 CUTAO60888 179 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 TOP3BO95985 862 aaKnown RBP13.89□□□□□ -0.19
LINC00339-202ENST00000416769 ZNF806P0C7X5 589 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 CYP2F1P24903 491 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 WEE1P30291 646 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 LONP1P36776 959 aaKnown RBP13.89□□□□□ -0.19
LINC00339-202ENST00000416769 MPLP40238 635 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms