RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 PLA2G2CQ5R387 149 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 PSAPL1Q6NUJ1 521 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 GPBP1Q86WP2 473 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 DCP1BQ8IZD4 617 aaKnown RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 CPA6Q8N4T0 437 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 TTC16Q8NEE8 873 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 USP13Q92995 863 aaPredicted RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 ACDQ96AP0 544 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 HHIPQ96QV1 700 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 P2RY13Q9BPV8 354 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 EDEM2Q9BV94 578 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 LSM14BQ9BX40 385 aaKnown RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 ZHX3Q9H4I2 956 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 HPS4Q9NQG7 708 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 TDP1Q9NUW8 608 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 CPSF3Q9UKF6 684 aaKnown RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 MAGED2Q9UNF1 606 aaPredicted RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 DERAQ9Y315 318 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 PCDHB5Q9Y5E4 795 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 OBSL1O75147 1896 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 SCN1AP35498 2009 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 A0A0B4J269 797 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 ANO9A1A5B4 782 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 TRAK2O60296 914 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 FAM189A1O60320 539 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 TBCAO75347 108 aaKnown RBP10.82□□□□□ -0.68
MDC1-202ENST00000416571 PRPF40AO75400 957 aaKnown RBP10.82□□□□□ -0.68
MDC1-202ENST00000416571 APBB3O95704 486 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 PIGRP01833 764 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 ADRB2P07550 413 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 CSH1P0DML2 217 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 CSH2P0DML3 217 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 IFNAR2P48551 515 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 NOVA1P51513 510 aaKnown RBP10.82□□□□□ -0.68
MDC1-202ENST00000416571 NLRP12P59046 1061 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 ATP2C1P98194 919 aaPredicted RBP10.82□□□□□ -0.68
MDC1-202ENST00000416571 TSPY1Q01534 308 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 PDGFRLQ15198 375 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 SV2CQ496J9 727 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 DAB2IPQ5VWQ8 1189 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 TXNDC8Q6A555 127 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 TCEAL6Q6IPX3 200 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 RPLP0P6Q8NHW5 317 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 TCEAL3Q969E4 200 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 CALML4Q96GE6 196 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 ASB7Q9H672 318 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 DPP3Q9NY33 737 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 CCL26Q9Y258 94 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 C2CD2Q9Y426 696 aa10.82□□□□□ -0.68
MDC1-202ENST00000416571 OTOL1A6NHN0 477 aaPredicted RBP10.81□□□□□ -0.68
MDC1-202ENST00000416571 SOBPA7XYQ1 873 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 KPNA7A9QM74 516 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 CAVIN2O95810 425 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 F11P03951 625 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 CKMP06732 381 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 NEFLP07196 543 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 ARSAP15289 507 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 UBA7P41226 1012 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 ACOT2P49753 483 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 GALK1P51570 392 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 DGKEP52429 567 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 RPL10AP62906 217 aaKnown RBP10.81□□□□□ -0.68
MDC1-202ENST00000416571 DMC1Q14565 340 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 NFE2Q16621 373 aaPredicted RBP10.81□□□□□ -0.68
MDC1-202ENST00000416571 TMEM119Q4V9L6 283 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 ARSHQ5FYA8 562 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 WSCD1Q658N2 575 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 SLFN12LQ6IEE8 588 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 SYT13Q7L8C5 426 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 LRRTM3Q86VH5 581 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 CCDC26Q8TAB7 109 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 KCNN1Q92952 543 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 CD101Q93033 1021 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 CHFRQ96EP1 664 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 ZNF560Q96MR9 790 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 DUSP15Q9H1R2 295 aaPredicted RBP10.81□□□□□ -0.68
MDC1-202ENST00000416571 TRPC7Q9HCX4 862 aa10.81□□□□□ -0.68
MDC1-202ENST00000416571 DUS2Q9NX74 493 aaKnown RBP10.81□□□□□ -0.68
MDC1-202ENST00000416571 UXTQ9UBK9 157 aaPredicted RBP10.81□□□□□ -0.68
MDC1-202ENST00000416571 SPEGQ15772 3267 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 C4orf47A7E2U8 309 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 ZIC2O95409 532 aaPredicted RBP10.8□□□□□ -0.68
MDC1-202ENST00000416571 PROS1P07225 676 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 USP17L7P0C7H9 530 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 HMGA1P17096 107 aaKnown RBP10.8□□□□□ -0.68
MDC1-202ENST00000416571 GJA4P35212 333 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 PNPLA4P41247 253 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 FAM160A1Q05DH4 1040 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 ZNF252P-AS1Q0IIN9 211 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 FOXC1Q12948 553 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 NR1H3Q13133 447 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 ZNF268Q14587 947 aaPredicted RBP10.8□□□□□ -0.68
MDC1-202ENST00000416571 MTF1Q14872 753 aa10.8□□□□□ -0.68
MDC1-202ENST00000416571 USP39Q53GS9 565 aaKnown RBP10.8□□□□□ -0.68
MDC1-202ENST00000416571 ARL6IP4Q66PJ3 421 aaKnown RBP10.8□□□□□ -0.68
MDC1-202ENST00000416571 SLC39A4Q6P5W5 647 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms