RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DDX43Q9NXZ2 648 aaKnown RBP16.24■□□□□ 0.19
UBXN4-203ENST00000416538 ASB3Q9Y575 518 aa16.24■□□□□ 0.19
UBXN4-203ENST00000416538 GABRDO14764 452 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 KIAA0391O15091 583 aaKnown RBP16.23■□□□□ 0.19
UBXN4-203ENST00000416538 SP9P0CG40 484 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 SOX9P48436 509 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 CYP2J2P51589 502 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 AMPD3Q01432 767 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 FCHO2Q0JRZ9 810 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 SNRNP35Q16560 246 aaKnown RBP16.23■□□□□ 0.19
UBXN4-203ENST00000416538 STXBP4Q6ZWJ1 553 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 MFSD6LQ8IWD5 586 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 THEM5Q8N1Q8 247 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 CACTINQ8WUQ7 758 aaKnown RBP16.23■□□□□ 0.19
UBXN4-203ENST00000416538 LEO1Q8WVC0 666 aaPredicted RBP16.23■□□□□ 0.19
UBXN4-203ENST00000416538 CLDN23Q96B33 292 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 ZFYVE19Q96K21 471 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 OSBPL6Q9BZF3 934 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 LRRC27Q9C0I9 530 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 MYH10P35580 1976 aa16.23■□□□□ 0.19
UBXN4-203ENST00000416538 MYBPHLA2RUH7 354 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 ZNF233A6NK53 670 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 HUS1O60921 280 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 ATP2C2O75185 946 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 PFKFB1P16118 471 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 TUFMP49411 452 aaKnown RBP16.22■□□□□ 0.19
UBXN4-203ENST00000416538 RBP5P82980 135 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 CYP24A1Q07973 514 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 ATL3Q6DD88 541 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 ITIH5Q86UX2 942 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 WDR49Q8IV35 697 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 TOP6BLQ8N6T0 577 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 RDH13Q8NBN7 331 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 FAM200AQ8TCP9 573 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 C2orf15Q8WU43 125 aaKnown RBP16.22■□□□□ 0.19
UBXN4-203ENST00000416538 ZNF516Q92618 1163 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 NKD2Q969F2 451 aaPredicted RBP16.22■□□□□ 0.19
UBXN4-203ENST00000416538 ANKRD36BP1Q96IX9 119 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 TRPV5Q9NQA5 729 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 FAM13BQ9NYF5 915 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 NDRG2Q9UN36 371 aaKnown RBP16.22■□□□□ 0.19
UBXN4-203ENST00000416538 PCDHB5Q9Y5E4 795 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 PIAS3Q9Y6X2 628 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 ZNF292O60281 2723 aa16.22■□□□□ 0.19
UBXN4-203ENST00000416538 EML5Q05BV3 1969 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 A0A1B0GVL5 298 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 F11P03951 625 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 DLATP10515 647 aaKnown RBP16.21■□□□□ 0.19
UBXN4-203ENST00000416538 CYP2F1P24903 491 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 LMO2P25791 158 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 CASP4P49662 377 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 NLRP12P59046 1061 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 PSMC1P62191 440 aaKnown RBP16.21■□□□□ 0.19
UBXN4-203ENST00000416538 TSPY1Q01534 308 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 STK4Q13043 487 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 VEPH1Q14D04 833 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 PSMD6Q15008 389 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 DDR2Q16832 855 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 TRAPPC11Q7Z392 1133 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 DCP1BQ8IZD4 617 aaKnown RBP16.21■□□□□ 0.19
UBXN4-203ENST00000416538 TMEM86AQ8N2M4 240 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 IRF7Q92985 503 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 PAGE5Q96GU1 130 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 HPDLQ96IR7 371 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 CGRRF1Q99675 332 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 ACBD6Q9BR61 282 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 SLC46A2Q9BY10 475 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 BCO2Q9BYV7 579 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 GPR88Q9GZN0 384 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 TASP1Q9H6P5 420 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 SPATA6Q9NWH7 488 aaPredicted RBP16.21■□□□□ 0.19
UBXN4-203ENST00000416538 GTF3C4Q9UKN8 822 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 HPSEQ9Y251 543 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 CCL26Q9Y258 94 aa16.21■□□□□ 0.19
UBXN4-203ENST00000416538 PVALEFA0A1B0GWK0 134 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 SLC38A8A6NNN8 435 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 ZNF263O14978 683 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 PRPF40AO75400 957 aaKnown RBP16.2■□□□□ 0.18
UBXN4-203ENST00000416538 CST3P01034 146 aaPredicted RBP16.2■□□□□ 0.18
UBXN4-203ENST00000416538 TNNC2P02585 160 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 SLFN14P0C7P3 912 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 PDIA4P13667 645 aaKnown RBP16.2■□□□□ 0.18
UBXN4-203ENST00000416538 SMARCB1Q12824 385 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 TXNDC11Q6PKC3 985 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 ZNF852Q6ZMS4 543 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 C12orf56Q8IXR9 622 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 XXYLT1Q8NBI6 393 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 ELMO3Q96BJ8 720 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 CCDC127Q96BQ5 260 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 MRPL45Q9BRJ2 306 aaKnown RBP16.2■□□□□ 0.18
UBXN4-203ENST00000416538 PRMT8Q9NR22 394 aaPredicted RBP16.2■□□□□ 0.18
UBXN4-203ENST00000416538 GTSE1Q9NYZ3 720 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
UBXN4-203ENST00000416538 CHADO15335 359 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 NOL4O94818 638 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 CDC25CP30307 473 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 RPS9P46781 194 aaKnown RBP16.19■□□□□ 0.18
UBXN4-203ENST00000416538 MYL7Q01449 175 aa16.19■□□□□ 0.18
UBXN4-203ENST00000416538 TNK2Q07912 1038 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms