RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TICRRQ7Z2Z1 1910 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 ARNTLO00327 626 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 GABRDO14764 452 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 TGFB1I1O43294 461 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 CSH1P0DML2 217 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 CSH2P0DML3 217 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 RPL10AP62906 217 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 CYP4F8P98187 520 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 CSTF1Q05048 431 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 DNM1Q05193 864 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 ARHGAP29Q52LW3 1261 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 SCARA3Q6AZY7 606 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 HS2ST1Q7LGA3 356 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 OSTM1Q86WC4 334 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 GPIHBP1Q8IV16 184 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 WDR49Q8IV35 697 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 ADGRF2Q8IZF7 708 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 ZNF687Q8N1G0 1237 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 SPRYD3Q8NCJ5 442 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 OR5B17Q8NGF7 314 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 HPDLQ96IR7 371 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 IER2Q9BTL4 223 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 BLZF1Q9H2G9 400 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 AGPAT3Q9NRZ7 376 aa18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 CGNQ9P2M7 1197 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 NUP210Q8TEM1 1887 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-208ENST00000416159 SOBPA7XYQ1 873 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 CLIC2O15247 247 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 F11P03951 625 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 COL4A2P08572 1712 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 HMGA1P17096 107 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 ACAT1P24752 427 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 DDX6P26196 483 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 AFMP43652 599 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 PLCB2Q00722 1185 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 PKP1Q13835 747 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 SNRNP35Q16560 246 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 SOWAHAQ2M3V2 549 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 MAMSTRQ6ZN01 415 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 NELFCDQ8IXH7 590 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 CEP57L1Q8IYX8 460 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 XXYLT1Q8NBI6 393 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 RDH13Q8NBN7 331 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 PATJQ8NI35 1801 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 BPIFB1Q8TDL5 484 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 SCFD1Q8WVM8 642 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 FNBP1Q96RU3 617 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 SLC46A2Q9BY10 475 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 CHRDQ9H2X0 955 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 LMAN1LQ9HAT1 526 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 GTF3C4Q9UKN8 822 aa18.87■□□□□ 0.61
PDLIM2-208ENST00000416159 PTPRJQ12913 1337 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 KINO60870 393 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 CCNE1P24864 410 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 CASP1P29466 404 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 GPR15P49685 360 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 KPNA1P52294 538 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 NLRP12P59046 1061 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 CUL4BQ13620 913 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 TRAPPC11Q7Z392 1133 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 LIMS2Q7Z4I7 341 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 SPATA2LQ8IUW3 424 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 CMTM8Q8IZV2 173 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 CELF5Q8N6W0 485 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 FUBP3Q96I24 572 aaKnown RBP eCLIP18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 LRRC3BQ96PB8 259 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 PKMYT1Q99640 499 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 SLC39A2Q9NP94 309 aa18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 THG1LQ9NWX6 298 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 UXTQ9UBK9 157 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-208ENST00000416159 DENND4CQ5VZ89 1909 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 SLFN14P0C7P3 912 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 DLATP10515 647 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 TNNI1P19237 187 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 CYP2F1P24903 491 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 CYP2J2P51589 502 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 MTAPQ13126 283 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 PSMD6Q15008 389 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 DDR2Q16832 855 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 BMT2Q1RMZ1 405 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 CFAP221Q4G0U5 840 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 FAM171BQ6P995 826 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 TMEM150AQ86TG1 271 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 C12orf56Q8IXR9 622 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 ATRIPQ8WXE1 791 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 MRPS31Q92665 395 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 CGRRF1Q99675 332 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 PRMT8Q9NR22 394 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 ZSCAN32Q9NX65 697 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 SERTAD1Q9UHV2 236 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 CDH9Q9ULB4 789 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 MAGED2Q9UNF1 606 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 PCDHGA2Q9Y5H1 932 aa18.85■□□□□ 0.61
PDLIM2-208ENST00000416159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 MYBPHLA2RUH7 354 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 PRAMEF12O95522 483 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 FAM163BP0C2L3 166 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 CHRNB1P11230 501 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 WARSP23381 471 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 AVPR1AP37288 418 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms