RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 SPATA18Q8TC71 538 aa24.4■■□□□ 1.5
PARD3B-205ENST00000415947 RSPH1Q8WYR4 309 aa24.4■■□□□ 1.5
PARD3B-205ENST00000415947 CASD1Q96PB1 797 aa24.4■■□□□ 1.5
PARD3B-205ENST00000415947 MCOLN1Q9GZU1 580 aa24.4■■□□□ 1.5
PARD3B-205ENST00000415947 CYTH4Q9UIA0 394 aa24.4■■□□□ 1.5
PARD3B-205ENST00000415947 SNX12Q9UMY4 172 aa24.4■■□□□ 1.5
PARD3B-205ENST00000415947 M0QYV0 167 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 M0QZQ0 153 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 B4GALT3O60512 393 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 TIMP1P01033 207 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 TERF1P54274 439 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 RNASELQ05823 741 aaKnown RBP24.39■■□□□ 1.49
PARD3B-205ENST00000415947 IKBKEQ14164 716 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 C11orf63Q6NUN7 778 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 NPAS4Q8IUM7 802 aa24.39■■□□□ 1.49
PARD3B-205ENST00000415947 TMEM189-UBE2V1I3L0A0 370 aa24.38■■□□□ 1.49
PARD3B-205ENST00000415947 ODC1P11926 461 aa24.38■■□□□ 1.49
PARD3B-205ENST00000415947 PKDCCQ504Y2 493 aa24.38■■□□□ 1.49
PARD3B-205ENST00000415947 GOLPH3Q9H4A6 298 aa24.38■■□□□ 1.49
PARD3B-205ENST00000415947 MRPL47Q9HD33 250 aaKnown RBP24.38■■□□□ 1.49
PARD3B-205ENST00000415947 FAM49BQ9NUQ9 324 aa24.38■■□□□ 1.49
PARD3B-205ENST00000415947 TRIM43BA6NCK2 446 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 NCK2O43639 380 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 CYP11A1P05108 521 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 MAMLD1Q13495 774 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 GOLGA7BQ2TAP0 167 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 PTPN20Q4JDL3 420 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 PEX26Q7Z412 305 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 NT5DC3Q86UY8 548 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 B3GALNT2Q8NCR0 500 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 MYRIPQ8NFW9 859 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 UBA3Q8TBC4 463 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 TRIM43Q96BQ3 446 aaPredicted RBP24.37■■□□□ 1.49
PARD3B-205ENST00000415947 SUSD3Q96L08 255 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 FAM193BQ96PV7 902 aaPredicted RBP24.37■■□□□ 1.49
PARD3B-205ENST00000415947 PARVAQ9NVD7 372 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 DDX43Q9NXZ2 648 aaKnown RBP24.37■■□□□ 1.49
PARD3B-205ENST00000415947 STRIP2Q9ULQ0 834 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 HYOU1Q9Y4L1 999 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 SCINQ9Y6U3 715 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 MICAL3Q7RTP6 2002 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 KIF4AO95239 1232 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 PFKMP08237 780 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 TCP1P17987 556 aaKnown RBP24.37■■□□□ 1.49
PARD3B-205ENST00000415947 BRCC3P46736 316 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 PAN2Q504Q3 1202 aaKnown RBP24.37■■□□□ 1.49
PARD3B-205ENST00000415947 UBE2Q1Q7Z7E8 422 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 UBE2Q2Q8WVN8 375 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 LPIN3Q9BQK8 851 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 DSEQ9UL01 958 aa24.37■■□□□ 1.49
PARD3B-205ENST00000415947 TCRBV5S1A1TA0A578 114 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 ARHGEF37A1IGU5 675 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 SLU7O95391 586 aaKnown RBP24.36■■□□□ 1.49
PARD3B-205ENST00000415947 ITGB1P05556 798 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 SETSIPP0DME0 302 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 ITGB8P26012 769 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 LLGL2Q6P1M3 1020 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 TTC30AQ86WT1 665 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 MSANTD4Q8NCY6 345 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 CPXM1Q96SM3 734 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 HESX1Q9UBX0 185 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 DNAJB4Q9UDY4 337 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 AMFRQ9UKV5 643 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 TIMM13Q9Y5L4 95 aaPredicted RBP24.36■■□□□ 1.49
PARD3B-205ENST00000415947 ALG6Q9Y672 507 aa24.36■■□□□ 1.49
PARD3B-205ENST00000415947 I3L4J1 428 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 PTPN1P18031 435 aaKnown RBP24.35■■□□□ 1.49
PARD3B-205ENST00000415947 GABRB2P47870 512 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 GSCP56915 257 aaPredicted RBP24.35■■□□□ 1.49
PARD3B-205ENST00000415947 PDCLQ13371 301 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 RPS6KA1Q15418 735 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 WHAMMP3Q1A5X7 153 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 PHLDB2Q86SQ0 1253 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 ANKRD52Q8NB46 1076 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 HASPINQ8TF76 798 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 C18orf8Q96DM3 657 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 OSBPL9Q96SU4 736 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 MRPL9Q9BYD2 267 aaKnown RBP24.35■■□□□ 1.49
PARD3B-205ENST00000415947 NRDE2Q9H7Z3 1164 aa24.35■■□□□ 1.49
PARD3B-205ENST00000415947 PRDM5Q9NQX1 630 aaPredicted RBP24.35■■□□□ 1.49
PARD3B-205ENST00000415947 SRGAP2O75044 1071 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 OR1G1P47890 313 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 GATMP50440 423 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 MESDQ14696 234 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.34■■□□□ 1.49
PARD3B-205ENST00000415947 METTL23Q86XA0 190 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 SLC35F5Q8WV83 523 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 HES6Q96HZ4 224 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 HNRNPABQ99729 332 aaKnown RBP24.34■■□□□ 1.49
PARD3B-205ENST00000415947 WDR35Q9P2L0 1181 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 ANAPC7Q9UJX3 599 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 PACSIN2Q9UNF0 486 aaPredicted RBP24.34■■□□□ 1.49
PARD3B-205ENST00000415947 ABHD14A-ACY1A0A1B0GW23 586 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 F8W810 466 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 ATP2C2O75185 946 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 CAPN15O75808 1086 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 CCDC130P13994 396 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 RAG1P15918 1043 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 TYMPP19971 482 aa24.34■■□□□ 1.49
PARD3B-205ENST00000415947 ACAT1P24752 427 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms