RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 DPP9Q86TI2 863 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 CXorf67Q86X51 503 aaPredicted RBP7.02□□□□□ -1.29
EPHA4-204ENST00000415749 KRT78Q8N1N4 520 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 MYCT1Q8N699 235 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 LRTOMTQ8WZ04 291 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 ZSWIM3Q96MP5 696 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 NOX5Q96PH1 765 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 LRFN3Q9BTN0 628 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 SEMA4AQ9H3S1 761 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 GREM2Q9H772 168 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 TDRD3Q9H7E2 651 aaKnown RBP7.02□□□□□ -1.29
EPHA4-204ENST00000415749 JADE2Q9NQC1 790 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 GPRC5BQ9NZH0 403 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 CROTQ9UKG9 612 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 GABRQQ9UN88 632 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 SMG5Q9UPR3 1016 aaKnown RBP7.02□□□□□ -1.29
EPHA4-204ENST00000415749 KCTD3Q9Y597 815 aa7.02□□□□□ -1.29
EPHA4-204ENST00000415749 DLG5Q8TDM6 1919 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 LAMB1P07942 1786 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 CAPN8A6NHC0 703 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 TCP10L2B9ZVM9 353 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 PDHXO00330 501 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 KPNA5O15131 536 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 EPB41L2O43491 1005 aaKnown RBP7.01□□□□□ -1.29
EPHA4-204ENST00000415749 MGEA5O60502 916 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 C1QTNF9P0C862 333 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 SYN1P17600 705 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 TNFSF4P23510 183 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 THBS2P35442 1172 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 DDIT3P35638 169 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 RAP1GAPP47736 663 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 CTSWP56202 376 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 FKBP1AP62942 108 aaKnown RBP7.01□□□□□ -1.29
EPHA4-204ENST00000415749 SLC6A3Q01959 620 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 SMAD4Q13485 552 aaKnown RBP7.01□□□□□ -1.29
EPHA4-204ENST00000415749 ANO6Q4KMQ2 910 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 ZNF648Q5T619 568 aaPredicted RBP7.01□□□□□ -1.29
EPHA4-204ENST00000415749 CCDC62Q6P9F0 684 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 CXXC5Q7LFL8 322 aaKnown RBP7.01□□□□□ -1.29
EPHA4-204ENST00000415749 MAATS1Q7Z4T9 603 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 ANKRD23Q86SG2 305 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 STK32CQ86UX6 486 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 FNIP1Q8TF40 1166 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 ZKSCAN4Q969J2 545 aaPredicted RBP7.01□□□□□ -1.29
EPHA4-204ENST00000415749 KIAA1191Q96A73 305 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 PWWP2AQ96N64 755 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 GUCD1Q96NT3 240 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 CGRRF1Q99675 332 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 TMEM39BQ9GZU3 492 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 WNT8AQ9H1J5 351 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 MYLK2Q9H1R3 596 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 OR10A5Q9H207 317 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 CERS4Q9HA82 394 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 CD320Q9NPF0 282 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 DMRT3Q9NQL9 472 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 WASF3Q9UPY6 502 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 SLC4A7Q9Y6M7 1214 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 ZSWIM8A7E2V4 1837 aa7.01□□□□□ -1.29
EPHA4-204ENST00000415749 RHPN2P1A8MT19 583 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 TIMM44O43615 452 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 LPLP06858 475 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 HOXB7P09629 217 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 MTHFD2P13995 350 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 HSD3B1P14060 373 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 TNFAIP3P21580 790 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 APEX1P27695 318 aaKnown RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 TXKP42681 527 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 FLT3LGP49771 235 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 AGFG1P52594 562 aaKnown RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 SLC5A3P53794 718 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 SLC16A1P53985 500 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 MANFP55145 182 aaKnown RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 MRPS9P82933 396 aaKnown RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 MAP3K12Q12852 859 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 PPIL2Q13356 520 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 MOGSQ13724 837 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 SSPNQ14714 243 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 DGKKQ5KSL6 1271 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 SWSAP1Q6NVH7 229 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 MZT2AQ6P582 158 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 TLDC1Q6P9B6 456 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 GPR155Q7Z3F1 870 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 TMEM151BQ8IW70 566 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 GPATCH11Q8N954 259 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 GOLGA6L2Q8N9W4 650 aaPredicted RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 RIN2Q8WYP3 895 aaPredicted RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 FERMT2Q96AC1 680 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 TBATAQ96M53 351 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 MPHOSPH8Q99549 860 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 SYT3Q9BQG1 590 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 TACO1Q9BSH4 297 aaKnown RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 AMNQ9BXJ7 453 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 PRKRIP1Q9H875 184 aaPredicted RBP7□□□□□ -1.29
EPHA4-204ENST00000415749 KCND1Q9NSA2 647 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 CORO2BQ9UQ03 480 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 JAG2Q9Y219 1238 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 GPR52Q9Y2T5 361 aa7□□□□□ -1.29
EPHA4-204ENST00000415749 SNAP23O00161 211 aa6.99□□□□□ -1.29
EPHA4-204ENST00000415749 NCK2O43639 380 aa6.99□□□□□ -1.29
EPHA4-204ENST00000415749 RNASEH2AO75792 299 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms