RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 FBXO4Q9UKT5 387 aa21.97■■□□□ 1.11
PTPRU-203ENST00000415600 FAM186AA6NE01 2351 aa21.97■■□□□ 1.11
PTPRU-203ENST00000415600 SCN1AP35498 2009 aa21.97■■□□□ 1.11
PTPRU-203ENST00000415600 HEPACAM2A8MVW5 462 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 POLR2DO15514 142 aaKnown RBP21.96■■□□□ 1.11
PTPRU-203ENST00000415600 PCSK1P29120 753 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 VIPR2P41587 438 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 RPS9P46781 194 aaKnown RBP21.96■■□□□ 1.11
PTPRU-203ENST00000415600 LHX1P48742 406 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 MLLT6P55198 1093 aaPredicted RBP21.96■■□□□ 1.11
PTPRU-203ENST00000415600 ZNF528Q3MIS6 628 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 UNC13DQ70J99 1090 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 CEP57L1Q8IYX8 460 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 CBX8Q9HC52 389 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 PDE11AQ9HCR9 933 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 GDAP2Q9NXN4 497 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 OBP2AQ9NY56 170 aa21.96■■□□□ 1.11
PTPRU-203ENST00000415600 CGNQ9P2M7 1197 aaKnown RBP21.96■■□□□ 1.11
PTPRU-203ENST00000415600 HOOK1Q9UJC3 728 aaKnown RBP21.96■■□□□ 1.11
PTPRU-203ENST00000415600 LMNAP02545 664 aaKnown RBP21.95■■□□□ 1.11
PTPRU-203ENST00000415600 HAPLN1P10915 354 aaPredicted RBP21.95■■□□□ 1.11
PTPRU-203ENST00000415600 PPP2R5DQ14738 602 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 GPR158Q5T848 1215 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 ASCL5Q7RTU5 278 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 PDCL2Q8N4E4 241 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 TOP6BLQ8N6T0 577 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 CLDN23Q96B33 292 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 FGFBP2Q9BYJ0 223 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 MTMR12Q9C0I1 747 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 TASP1Q9H6P5 420 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 ABCB6Q9NP58 842 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 INTS13Q9NVM9 706 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 DDX43Q9NXZ2 648 aaKnown RBP21.95■■□□□ 1.11
PTPRU-203ENST00000415600 HSPBP1Q9NZL4 362 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 SNX9Q9Y5X1 595 aa21.95■■□□□ 1.11
PTPRU-203ENST00000415600 MIA3Q5JRA6 1907 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 CHADO15335 359 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 SOAT2O75908 522 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 SP9P0CG40 484 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 CD72P21854 359 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 ZNF165P49910 485 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 RPL10AP62906 217 aaKnown RBP21.95■■□□□ 1.1
PTPRU-203ENST00000415600 DPH6Q7L8W6 267 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 ARID3BQ8IVW6 561 aaPredicted RBP21.95■■□□□ 1.1
PTPRU-203ENST00000415600 TTC9BQ8N6N2 239 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 ZNF507Q8TCN5 953 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 ERCC4Q92889 916 aaPredicted RBP21.95■■□□□ 1.1
PTPRU-203ENST00000415600 FNBP1Q96RU3 617 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 C8orf33Q9H7E9 229 aaPredicted RBP21.95■■□□□ 1.1
PTPRU-203ENST00000415600 THG1LQ9NWX6 298 aaKnown RBP21.95■■□□□ 1.1
PTPRU-203ENST00000415600 USP25Q9UHP3 1055 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 PIAS3Q9Y6X2 628 aa21.95■■□□□ 1.1
PTPRU-203ENST00000415600 USP34Q70CQ2 3546 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 ACTN4O43707 911 aaKnown RBP21.94■■□□□ 1.1
PTPRU-203ENST00000415600 DDX6P26196 483 aaKnown RBP eCLIP21.94■■□□□ 1.1
PTPRU-203ENST00000415600 TARSP26639 723 aaKnown RBP21.94■■□□□ 1.1
PTPRU-203ENST00000415600 WEE1P30291 646 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 PLCB2Q00722 1185 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 ARHGAP29Q52LW3 1261 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 POTEHQ6S545 545 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 GAREM2Q75VX8 874 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 WDR49Q8IV35 697 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 ADGRF2Q8IZF7 708 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 FAM3CQ92520 227 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 LPIN3Q9BQK8 851 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 UXTQ9UBK9 157 aaPredicted RBP21.94■■□□□ 1.1
PTPRU-203ENST00000415600 SERTAD1Q9UHV2 236 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 L1RE1Q9UN81 338 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 F5P12259 2224 aa21.94■■□□□ 1.1
PTPRU-203ENST00000415600 TSC2P49815 1807 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 PVALEFA0A1B0GWK0 134 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 SOBPA7XYQ1 873 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 CSH1P0DML2 217 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 CSH2P0DML3 217 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 KPNA1P52294 538 aaPredicted RBP21.93■■□□□ 1.1
PTPRU-203ENST00000415600 NLRP12P59046 1061 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 FCHO2Q0JRZ9 810 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 C11orf57Q6ZUT1 292 aaPredicted RBP21.93■■□□□ 1.1
PTPRU-203ENST00000415600 LRRTM3Q86VH5 581 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 ZSWIM2Q8NEG5 633 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 GOLGA5Q8TBA6 731 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 HPDLQ96IR7 371 aa21.93■■□□□ 1.1
PTPRU-203ENST00000415600 MTF2Q9Y483 593 aaPredicted RBP21.93■■□□□ 1.1
PTPRU-203ENST00000415600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.92■■□□□ 1.1
PTPRU-203ENST00000415600 LRRN2O75325 713 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 ATF6P18850 670 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 MAPRE1Q15691 268 aaKnown RBP21.92■■□□□ 1.1
PTPRU-203ENST00000415600 SNRNP35Q16560 246 aaKnown RBP21.92■■□□□ 1.1
PTPRU-203ENST00000415600 INTS6LQ5JSJ4 861 aaKnown RBP21.92■■□□□ 1.1
PTPRU-203ENST00000415600 C4orf50Q6ZRC1 276 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 EPM2AIP1Q7L775 607 aaPredicted RBP21.92■■□□□ 1.1
PTPRU-203ENST00000415600 SPATA2LQ8IUW3 424 aaPredicted RBP21.92■■□□□ 1.1
PTPRU-203ENST00000415600 ADSSL1Q8N142 457 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 GIPC2Q8TF65 315 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 HPS3Q969F9 1004 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 CCDC34Q96HJ3 373 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 AGPAT3Q9NRZ7 376 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 NDRG2Q9UN36 371 aaKnown RBP21.92■■□□□ 1.1
PTPRU-203ENST00000415600 MYO15AQ9UKN7 3530 aa21.92■■□□□ 1.1
PTPRU-203ENST00000415600 TNNI1P19237 187 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms