RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 PAGE5Q96GU1 130 aa26.81■■□□□ 1.88
HLA-C-204ENST00000415537 TRPV5Q9NQA5 729 aa26.81■■□□□ 1.88
HLA-C-204ENST00000415537 EXOC1Q9NV70 894 aa26.81■■□□□ 1.88
HLA-C-204ENST00000415537 USP25Q9UHP3 1055 aa26.81■■□□□ 1.88
HLA-C-204ENST00000415537 ACTN4O43707 911 aaKnown RBP26.8■■□□□ 1.88
HLA-C-204ENST00000415537 PFKFB1P16118 471 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 CYP24A1Q07973 514 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 PSMD6Q15008 389 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 TRAPPC11Q7Z392 1133 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 GPIHBP1Q8IV16 184 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 CSGALNACT1Q8TDX6 532 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 CCDC127Q96BQ5 260 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 TASP1Q9H6P5 420 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 GTF3C4Q9UKN8 822 aa26.8■■□□□ 1.88
HLA-C-204ENST00000415537 TARSP26639 723 aaKnown RBP26.79■■□□□ 1.88
HLA-C-204ENST00000415537 RPL10AP62906 217 aaKnown RBP26.79■■□□□ 1.88
HLA-C-204ENST00000415537 CYP4F8P98187 520 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 PSMD2Q13200 908 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 OSTM1Q86WC4 334 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 GOLGA5Q8TBA6 731 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 MMS19Q96T76 1030 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 CGRRF1Q99675 332 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 ABCB6Q9NP58 842 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 SPATA6Q9NWH7 488 aaPredicted RBP26.79■■□□□ 1.88
HLA-C-204ENST00000415537 ZDHHC9Q9Y397 364 aa26.79■■□□□ 1.88
HLA-C-204ENST00000415537 DENND4CQ5VZ89 1909 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 ZNF638Q14966 1978 aaKnown RBP26.78■■□□□ 1.88
HLA-C-204ENST00000415537 USP34Q70CQ2 3546 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 GABRDO14764 452 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 EXOC3O60645 756 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 CSH1P0DML2 217 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 CSH2P0DML3 217 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 SPATA2LQ8IUW3 424 aaPredicted RBP26.78■■□□□ 1.88
HLA-C-204ENST00000415537 C12orf56Q8IXR9 622 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 MKNK1Q9BUB5 465 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 IL21Q9HBE4 155 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 ZMYM5Q9UJ78 669 aa26.78■■□□□ 1.88
HLA-C-204ENST00000415537 NDRG2Q9UN36 371 aaKnown RBP26.78■■□□□ 1.88
HLA-C-204ENST00000415537 MAGED2Q9UNF1 606 aaPredicted RBP26.78■■□□□ 1.88
HLA-C-204ENST00000415537 NCANO14594 1321 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 PRR23AA6NEV1 266 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 CHADO15335 359 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 LAMTOR5O43504 91 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 KLRC4O43908 158 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 CYP2F1P24903 491 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 KMT5BQ4FZB7 885 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 ASCL5Q7RTU5 278 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 FAM3CQ92520 227 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 RSPRY1Q96DX4 576 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 OBP2AQ9NY56 170 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 PIAS3Q9Y6X2 628 aa26.77■■□□□ 1.88
HLA-C-204ENST00000415537 MYO15AQ9UKN7 3530 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 CACNA1IQ9P0X4 2223 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 CST3P01034 146 aaPredicted RBP26.76■■□□□ 1.87
HLA-C-204ENST00000415537 MYL1P05976 194 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 WEE1P30291 646 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 SYKP43405 635 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 GPR15P49685 360 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 FCHO2Q0JRZ9 810 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 STK4Q13043 487 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 TRPC3Q13507 836 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 DDR2Q16832 855 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 ZC3H14Q6PJT7 736 aaKnown RBP26.76■■□□□ 1.87
HLA-C-204ENST00000415537 C4orf50Q6ZRC1 276 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 CLDN23Q96B33 292 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 CHAMP1Q96JM3 812 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 PKMYT1Q99640 499 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 SCAND2PQ9GZW5 306 aaPredicted RBP26.76■■□□□ 1.87
HLA-C-204ENST00000415537 UXTQ9UBK9 157 aaPredicted RBP26.76■■□□□ 1.87
HLA-C-204ENST00000415537 CDH9Q9ULB4 789 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 HPSEQ9Y251 543 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 PATJQ8NI35 1801 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 COL4A2P08572 1712 aa26.76■■□□□ 1.87
HLA-C-204ENST00000415537 HCRTO43612 131 aa26.75■■□□□ 1.87
HLA-C-204ENST00000415537 SP9P0CG40 484 aa26.75■■□□□ 1.87
HLA-C-204ENST00000415537 RPS9P46781 194 aaKnown RBP26.75■■□□□ 1.87
HLA-C-204ENST00000415537 MAPRE1Q15691 268 aaKnown RBP26.75■■□□□ 1.87
HLA-C-204ENST00000415537 CFAP221Q4G0U5 840 aa26.75■■□□□ 1.87
HLA-C-204ENST00000415537 ARHGAP29Q52LW3 1261 aa26.75■■□□□ 1.87
HLA-C-204ENST00000415537 SDHAF4Q5VUM1 108 aa26.75■■□□□ 1.87
HLA-C-204ENST00000415537 FUBP3Q96I24 572 aaKnown RBP eCLIP26.75■■□□□ 1.87
HLA-C-204ENST00000415537 SYT15Q9BQS2 421 aa26.75■■□□□ 1.87
HLA-C-204ENST00000415537 MYBPHLA2RUH7 354 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 PHACTR2O75167 634 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 F11P03951 625 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 HMGA1P17096 107 aaKnown RBP26.74■■□□□ 1.87
HLA-C-204ENST00000415537 DDX6P26196 483 aaKnown RBP eCLIP26.74■■□□□ 1.87
HLA-C-204ENST00000415537 AVPR1AP37288 418 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 KPNA1P52294 538 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-204ENST00000415537 NLRP12P59046 1061 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 TNNC1P63316 161 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 FAM171BQ6P995 826 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 LIMS2Q7Z4I7 341 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 KIAA0895Q8NCT3 520 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 BPIFB1Q8TDL5 484 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 KBTBD7Q8WVZ9 684 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 CCDC47Q96A33 483 aaKnown RBP26.74■■□□□ 1.87
HLA-C-204ENST00000415537 SLC46A2Q9BY10 475 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 SNX25Q9H3E2 840 aa26.74■■□□□ 1.87
HLA-C-204ENST00000415537 SEMA4AQ9H3S1 761 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms