RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 LMBRD2Q68DH5 695 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 SPOPLQ6IQ16 392 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 POLNQ7Z5Q5 900 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 PASD1Q8IV76 773 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 ALKBH8Q96BT7 664 aaKnown RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 DENND2DQ9H6A0 471 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 RNPEPL1Q9HAU8 725 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 PIDD1Q9HB75 910 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 JPH1Q9HDC5 661 aaPredicted RBP10.31□□□□□ -0.76
CD44-206ENST00000415148 CYLDQ9NQC7 956 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 SAR1AQ9NR31 198 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 KANSL3Q9P2N6 904 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 SIP14410 1827 aa10.31□□□□□ -0.76
CD44-206ENST00000415148 A0A0B4J269 797 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 PI4K2BG5E9Z4 385 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 K7ERI5 159 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 VWA5AO00534 786 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 CDH5P33151 784 aaPredicted RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 NOP14P78316 857 aaKnown RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 SATB1Q01826 763 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 WASHC2DQ5SRD0 308 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 THEMIS2Q5TEJ8 643 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 TMEM35BQ8NCS4 154 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 C10orf82Q8WW14 230 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 ACSF2Q96CM8 615 aaPredicted RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 ZBTB10Q96DT7 871 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 MIPEPQ99797 713 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 TUBB6Q9BUF5 446 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 IMPG2Q9BZV3 1241 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 VPS37BQ9H9H4 285 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 NUB1Q9Y5A7 615 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 ZNF541Q9H0D2 1346 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 CNTNAP2Q9UHC6 1331 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 WDR91A4D1P6 747 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 SPATA31C2B4DYI2 1134 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 C2CD2LO14523 706 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 TM9SF1O15321 606 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 ATF7P17544 494 aaPredicted RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 CA4P22748 312 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 CDKN2BP42772 138 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 WNT7BP56706 349 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 ACTR2P61160 394 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 RPL7AP62424 266 aaKnown RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 NCOA4Q13772 614 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 EMC2Q15006 297 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 MAPK6Q16659 721 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 WDR72Q3MJ13 1102 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 KAZNQ674X7 775 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 ADGRD1Q6QNK2 874 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 ZBED8Q8IZ13 594 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 SLC35B2Q8TB61 432 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 SYT15Q9BQS2 421 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 MAK16Q9BXY0 300 aaKnown RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 HAPLN2Q9GZV7 340 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 PORCNQ9H237 461 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 C10orf88Q9H8K7 445 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 RNF146Q9NTX7 359 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 CYP39A1Q9NYL5 469 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 LNPEPQ9UIQ6 1025 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 RABGEF1Q9UJ41 708 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 CORO1CQ9ULV4 474 aaPredicted RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
CD44-206ENST00000415148 SNCAIPQ9Y6H5 919 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 IVNS1ABPQ9Y6Y0 642 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 PTPRJQ12913 1337 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 ADGRA2Q96PE1 1338 aa10.3□□□□□ -0.76
CD44-206ENST00000415148 LUC7L3O95232 432 aaKnown RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 ATG7O95352 703 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 SUPT20HL2P0C7V6 817 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 CALB2P22676 271 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ARL2P36404 184 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ARL4CP56559 192 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ZNF252P-AS1Q0IIN9 211 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 OVGP1Q12889 678 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 PDIA2Q13087 525 aaKnown RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 HIF1AQ16665 826 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 KLHL38Q2WGJ6 581 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 SUPT20HL1Q3ZLR7 823 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 TAF1BQ53T94 588 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 CMPK2Q5EBM0 449 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ZFYVE27Q5T4F4 411 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 FYB2Q5VWT5 728 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 DNAJC24Q6P3W2 148 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 OTOAQ7RTW8 1153 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 CCDC60Q8IWA6 550 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 PPIL6Q8IXY8 311 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 TEX9Q8N6V9 391 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 PHC3Q8NDX5 983 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 SPDYE1Q8NFV5 336 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 DEPTORQ8TB45 409 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 STK32AQ8WU08 396 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 UCMAQ8WVF2 138 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 HAUS1Q96CS2 278 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 NUDCD1Q96RS6 583 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms