RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 BOLLQ8N9W6 283 aaKnown RBP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 NTN5Q8WTR8 489 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 TFAP2BQ92481 460 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 ALG8Q9BVK2 526 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 RTFDC1Q9BY42 306 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 SMOC2Q9H3U7 446 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 NMRK2Q9NPI5 230 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 MRPS18AQ9NVS2 196 aaKnown RBP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 KLHL42Q9P2K6 505 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 ENTPD2Q9Y5L3 495 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 ADGRA2Q96PE1 1338 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 MGST3O14880 152 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 VPS4BO75351 444 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 PIM1P11309 404 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 GCLCP48506 637 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 SOX8P57073 446 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 EXOSC9Q06265 439 aaKnown RBP4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 ZNF267Q14586 743 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 CCDC142Q17RM4 750 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 DENND1CQ8IV53 801 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 FAM46DQ8NEK8 389 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 PLBD2Q8NHP8 589 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 FAM136AQ96C01 138 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 UROC1Q96N76 676 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 MOGAT1Q96PD6 335 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 TPSD1Q9BZJ3 242 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 TERF2IPQ9NYB0 399 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 ZIM2Q9NZV7 527 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 PCDHA6Q9UN73 950 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 PLEKHM1Q9Y4G2 1056 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 PRXQ9BXM0 1461 aa4.56□□□□□ -1.68
HMGB3P23-201ENST00000414981 SPATA31A6Q5VVP1 1343 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 PEX14O75381 377 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 DNAJB5O75953 348 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 C1QL1O75973 258 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 PARNO95453 639 aaKnown RBP4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 CHRM2P08172 466 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 GPSM2P81274 684 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 BOP1Q14137 746 aaKnown RBP4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 IQCB1Q15051 598 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 TXNRD1Q16881 649 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 LONRF3Q496Y0 759 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 RBM20Q5T481 1227 aaKnown RBP4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 CXorf57Q6NSI4 855 aaKnown RBP4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 EPM2AIP1Q7L775 607 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 PEG10Q86TG7 708 aaKnown RBP4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 DTX2Q86UW9 622 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 TPH2Q8IWU9 490 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 CAMKK1Q8N5S9 505 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 FBXO41Q8TF61 875 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 RFKQ969G6 155 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 PBKQ96KB5 322 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 KLK15Q9H2R5 256 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 CNNM1Q9NRU3 951 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 SERTAD4Q9NUC0 356 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 PIH1D1Q9NWS0 290 aaKnown RBP4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 EHD3Q9NZN3 535 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 GABBR1Q9UBS5 961 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 HESX1Q9UBX0 185 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
HMGB3P23-201ENST00000414981 CCNB3Q8WWL7 1395 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 VWC2LB2RUY7 222 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 GCOM1H8Y6P7 765 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 M0QYG6 137 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 UBXN7O94888 489 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 C1RP00736 705 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 ATXN1LP0C7T5 689 aaKnown RBP4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 ELFN1P0C7U0 828 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 CYP2C9P11712 490 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 PTMSP20962 102 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 HTR1BP28222 390 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 CD6P30203 668 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 KCNJ5P48544 419 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 AGFG1P52594 562 aaKnown RBP4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 C21orf58P58505 322 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 RAB1AP62820 205 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 BMPR2Q13873 1038 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 RALBP1Q15311 655 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 PLAC9Q5JTB6 97 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 AKNAD1Q5T1N1 836 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 ICE2Q659A1 982 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 DAAM2Q86T65 1068 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 MRGPRX1Q96LB2 322 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 SLC46A1Q96NT5 459 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 TAAR9Q96RI9 348 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 ACO2Q99798 780 aaKnown RBP4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 PTDSS2Q9BVG9 487 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 SPATA5L1Q9BVQ7 753 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 ACTRT3Q9BYD9 372 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 ARMT1Q9H993 441 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 ARPP21Q9UBL0 812 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 THRAP3Q9Y2W1 955 aaKnown RBP4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 RUSC2Q8N2Y8 1516 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 TOP2BQ02880 1626 aa4.54□□□□□ -1.68
HMGB3P23-201ENST00000414981 SYNJ1O43426 1573 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 MASP2O00187 686 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 DCLK1O15075 740 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 CTNND1O60716 968 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms