RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 PRORYQ9H606 182 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 DUS2Q9NX74 493 aaKnown RBP17.16■□□□□ 0.34
CPNE1-208ENST00000414711 TUBGCP4Q9UGJ1 667 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 TNFSF13BQ9Y275 285 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 STK24Q9Y6E0 443 aa17.16■□□□□ 0.34
CPNE1-208ENST00000414711 TRABD2BA6NFA1 517 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 CAPN9O14815 690 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 BAG4O95429 457 aaKnown RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 HMGB1P09429 215 aaKnown RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 EFNA5P52803 228 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 RPL6Q02878 288 aaKnown RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 ZNF268Q14587 947 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 PPP2R5AQ15172 486 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 TMEM150AQ86TG1 271 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 MARCH9Q86YJ5 346 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 OSCP1Q8WVF1 389 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 HMGB4Q8WW32 186 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 NACC1Q96RE7 527 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 HNRNPABQ99729 332 aaKnown RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 NAP1L4Q99733 375 aaKnown RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 CLMPQ9H6B4 373 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 KIAA1522Q9P206 1035 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-208ENST00000414711 WNT6Q9Y6F9 365 aa17.15■□□□□ 0.34
CPNE1-208ENST00000414711 CBFA2T3O75081 653 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.33
CPNE1-208ENST00000414711 CPA1P15085 419 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 HSPA4P34932 840 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 IFNAR2P48551 515 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 KRT32Q14532 448 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 MGAT5BQ3V5L5 792 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 OVOS1Q6IE37 1185 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 ALLCQ8N6M5 410 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 TTC16Q8NEE8 873 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 ACAP3Q96P50 834 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 PCOLCE2Q9UKZ9 415 aa17.14■□□□□ 0.33
CPNE1-208ENST00000414711 PTPRQQ9UMZ3 2332 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 ITPKBP27987 946 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 TUFMP49411 452 aaKnown RBP17.13■□□□□ 0.33
CPNE1-208ENST00000414711 AARSP49588 968 aaKnown RBP eCLIP17.13■□□□□ 0.33
CPNE1-208ENST00000414711 NLRP12P59046 1061 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 EML3Q32P44 896 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 TXNDC8Q6A555 127 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 FAM177A1Q8N128 213 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-208ENST00000414711 TXNDC5Q8NBS9 432 aaKnown RBP17.13■□□□□ 0.33
CPNE1-208ENST00000414711 GIPC2Q8TF65 315 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-208ENST00000414711 ZNF638Q14966 1978 aaKnown RBP17.13■□□□□ 0.33
CPNE1-208ENST00000414711 CITO14578 2027 aa17.13■□□□□ 0.33
CPNE1-208ENST00000414711 TCRBV21S2A2A0A5A6 115 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 CAPN8A6NHC0 703 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 DEXIO95424 95 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 KLF8O95600 359 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-208ENST00000414711 OPRD1P41143 372 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
CPNE1-208ENST00000414711 MRPS21P82921 87 aaKnown RBP17.12■□□□□ 0.33
CPNE1-208ENST00000414711 CFHR1Q03591 330 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
CPNE1-208ENST00000414711 USP4Q13107 963 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 NR1H3Q13133 447 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 CAMK2BQ13554 666 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 ZNF77Q15935 545 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 PIK3AP1Q6ZUJ8 805 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 MON1AQ86VX9 555 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 PGBD3Q8N328 593 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 AIFM3Q96NN9 605 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 PTPRHQ9HD43 1115 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
CPNE1-208ENST00000414711 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 A0A1W2PQD8 194 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 SGK1O00141 431 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 F11P03951 625 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 CDR1P51861 262 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 FAM160A1Q05DH4 1040 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 PLEKHG6Q3KR16 790 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 DSTYKQ6XUX3 929 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 SLC36A4Q6YBV0 504 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 EFCAB13Q8IY85 973 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 GALNT15Q8N3T1 639 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 IL17RCQ8NAC3 791 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 MRPS31Q92665 395 aaKnown RBP17.11■□□□□ 0.33
CPNE1-208ENST00000414711 ACO2Q99798 780 aaKnown RBP17.11■□□□□ 0.33
CPNE1-208ENST00000414711 TOR4AQ9NXH8 423 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 DACH1Q9UI36 760 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 KCNJ14Q9UNX9 436 aa17.11■□□□□ 0.33
CPNE1-208ENST00000414711 GOLGA4Q13439 2230 aaKnown RBP17.11■□□□□ 0.33
CPNE1-208ENST00000414711 PTPN13Q12923 2485 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 MUC22E2RYF6 1773 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-208ENST00000414711 OBSL1O75147 1896 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 MCF2P10911 925 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 CYP11B2P19099 503 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 TYMPP19971 482 aa17.1■□□□□ 0.33
CPNE1-208ENST00000414711 HSF5Q4G112 596 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-208ENST00000414711 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms