RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DNAH12Q6ZR08 3092 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 RLFQ13129 1914 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 COL11A1P12107 1806 aaPredicted RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 PARP14Q460N5 1801 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 GMNCA6NCL1 334 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 LGALS16A8MUM7 142 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 VWA5AO00534 786 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CCNT1O60563 726 aaKnown RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 TDP2O95551 362 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 ITGBL1O95965 494 aaPredicted RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 PAHP00439 452 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 PDGFAP04085 211 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 RECQLP46063 649 aaPredicted RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CTCFP49711 727 aaPredicted RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 DNM2P50570 870 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 TNFAIP2Q03169 654 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 PLS1Q14651 629 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CTC1Q2NKJ3 1217 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 KRTCAP3Q53RY4 240 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 LIN54Q6MZP7 749 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 NXPE4Q6UWF7 544 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 ERO1BQ86YB8 467 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 DAGLBQ8NCG7 672 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 WHAMMQ8TF30 809 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 UCMAQ8WVF2 138 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CTNNBL1Q8WYA6 563 aaPredicted RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CYFIP2Q96F07 1278 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 CCDC43Q96MW1 224 aaKnown RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 SH3GL3Q99963 347 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 OCSTAMPQ9BR26 566 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 TMEM60Q9H2L4 133 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 ITM2CQ9NQX7 267 aa9.92□□□□□ -0.82
SNHG3-201ENST00000413987 C19orf53Q9UNZ5 99 aaPredicted RBP9.92□□□□□ -0.82
SNHG3-201ENST00000413987 NEMP1O14524 444 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 SLC37A4O43826 429 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 MGRN1O60291 552 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ZBED4O75132 1171 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 DNAJC8O75937 253 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ID4P47928 161 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 KIF11P52732 1056 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 YARSP54577 528 aaKnown RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ZNF252P-AS1Q0IIN9 211 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 FAPQ12884 760 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 GRB10Q13322 594 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 NAA25Q14CX7 972 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 IL17AQ16552 155 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ZNF423Q2M1K9 1284 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ANKRD20A8PQ5CZ79 823 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ZNF658Q5TYW1 1059 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 FOXB2Q5VYV0 432 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 HAUS3Q68CZ6 603 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 KCTD16Q68DU8 428 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 NAIF1Q69YI7 327 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 WDR59Q6PJI9 974 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 CRELD2Q6UXH1 353 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 LRIG3Q6UXM1 1119 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 FAM160B2Q86V87 743 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 AHI1Q8N157 1196 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 SH2D3CQ8N5H7 860 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 CCHCR1Q8TD31 782 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 NOC3LQ8WTT2 800 aaKnown RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 NELFBQ8WX92 580 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 TMEM106CQ9BVX2 250 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 SMOC1Q9H4F8 434 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 VPS37BQ9H9H4 285 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 NHEJ1Q9H9Q4 299 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 SLC38A10Q9HBR0 1119 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 GBA2Q9HCG7 927 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 TRAF3IP3Q9Y228 551 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ESYT2A0FGR8 921 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 TISP43B9A030 160 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 B9A039 149 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ZBTB14O43829 449 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 EOMESO95936 686 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 KRT14P02533 472 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ATP4AP20648 1035 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 PPATQ06203 517 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 ITGB3BPQ13352 177 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 TMEM132BQ14DG7 1078 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 NONOQ15233 471 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 CCDC38Q502W7 563 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 SLC30A10Q6XR72 485 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 CATSPERGQ6ZRH7 1159 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 HEATR4Q86WZ0 1026 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 SLITRK4Q8IW52 837 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 GALNT12Q8IXK2 581 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 LRRC71Q8N4P6 559 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 EIF1ADQ8N9N8 165 aaKnown RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 HDAC7Q8WUI4 952 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 SLC10A4Q96EP9 437 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 RHOVQ96L33 236 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 OSBPL9Q96SU4 736 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 TREX2Q9BQ50 279 aaPredicted RBP9.91□□□□□ -0.82
SNHG3-201ENST00000413987 NACA2Q9H009 215 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 VPS11Q9H270 941 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 GDF3Q9NR23 364 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 DISC1Q9NRI5 854 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 HOMER3Q9NSC5 361 aa9.91□□□□□ -0.82
SNHG3-201ENST00000413987 MYH7BA7E2Y1 1941 aa9.9□□□□□ -0.82
SNHG3-201ENST00000413987 A0A0G2JLL6 359 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms