RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ADSSP30520 456 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 ABCD1P33897 745 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 MPLP40238 635 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 GALK1P51570 392 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 WNT7BP56706 349 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 MCM6Q14566 821 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-210ENST00000413578 DCP1BQ8IZD4 617 aaKnown RBP13.12□□□□□ -0.31
LIMS2-210ENST00000413578 THEM5Q8N1Q8 247 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 C12orf50Q8NA57 414 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-210ENST00000413578 CXorf38Q8TB03 319 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 RAD54LQ92698 747 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 PKMYT1Q99640 499 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
LIMS2-210ENST00000413578 STRA6Q9BX79 667 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 DUSP15Q9H1R2 295 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-210ENST00000413578 PPP4R2Q9NY27 417 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 DPP3Q9NY33 737 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 SLC8A2Q9UPR5 921 aa13.12□□□□□ -0.31
LIMS2-210ENST00000413578 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 KPNA7A9QM74 516 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 PPP1R37O75864 691 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 NOL4O94818 638 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 KCNK5O95279 499 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 CSH1P0DML2 217 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 CSH2P0DML3 217 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 CCDC192P0DO97 292 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 PLCG1P19174 1290 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 DRD1P21728 446 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 GJA4P35212 333 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 GRIN1Q05586 938 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 BFSP1Q12934 665 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 USP4Q13107 963 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 PDGFRLQ15198 375 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 ZNF77Q15935 545 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 TAF12Q16514 161 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 ADALQ6DHV7 355 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 SLFN12LQ6IEE8 588 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 SYT13Q7L8C5 426 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 NT5DC4Q86YG4 428 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 STKLD1Q8NE28 680 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 TRMT2BQ96GJ1 504 aaKnown RBP13.11□□□□□ -0.31
LIMS2-210ENST00000413578 MYRFLQ96LU7 910 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 HHIPQ96QV1 700 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 IKZF4Q9H2S9 585 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 ABCB6Q9NP58 842 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 VPS45Q9NRW7 570 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 EBF1Q9UH73 591 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 AGO2Q9UKV8 859 aaKnown RBP13.11□□□□□ -0.31
LIMS2-210ENST00000413578 KIF3AQ9Y496 699 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 PCDHB5Q9Y5E4 795 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 SCN1AP35498 2009 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 GREB1Q4ZG55 1949 aa13.11□□□□□ -0.31
LIMS2-210ENST00000413578 UBA7P41226 1012 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 AMPD2Q01433 879 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 FAM160A1Q05DH4 1040 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
LIMS2-210ENST00000413578 MTF1Q14872 753 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 KARSQ15046 597 aaKnown RBP13.1□□□□□ -0.31
LIMS2-210ENST00000413578 NFE2Q16621 373 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-210ENST00000413578 SV2CQ496J9 727 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 SDHAF4Q5VUM1 108 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 TCEAL6Q6IPX3 200 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 ZNF720Q7Z2F6 126 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 PDCL2Q8N4E4 241 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 OSCP1Q8WVF1 389 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 LARP4BQ92615 738 aaKnown RBP13.1□□□□□ -0.31
LIMS2-210ENST00000413578 MRPS31Q92665 395 aaKnown RBP13.1□□□□□ -0.31
LIMS2-210ENST00000413578 TCEAL3Q969E4 200 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 PI4K2AQ9BTU6 479 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 ECT2Q9H8V3 914 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 L1RE1Q9UN81 338 aa13.1□□□□□ -0.31
LIMS2-210ENST00000413578 FRYQ5TBA9 3013 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
LIMS2-210ENST00000413578 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
LIMS2-210ENST00000413578 TCF3P15923 654 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 KCNA4P22459 653 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 LONP1P36776 959 aaKnown RBP13.09□□□□□ -0.31
LIMS2-210ENST00000413578 PNPLA4P41247 253 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 TSPY1Q01534 308 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 DDR2Q16832 855 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 CCDC142Q17RM4 750 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 EML3Q32P44 896 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
LIMS2-210ENST00000413578 SCARA3Q6AZY7 606 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 C1orf127Q8N9H9 656 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 RPLP0P6Q8NHW5 317 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 ZNF560Q96MR9 790 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 SLC22A12Q96S37 553 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 ACBD6Q9BR61 282 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 UXTQ9UBK9 157 aaPredicted RBP13.09□□□□□ -0.31
LIMS2-210ENST00000413578 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms