RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ZNF536O15090 1300 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 DCLK1O15075 740 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 LAMTOR5O43504 91 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 ASNA1O43681 348 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 TRIM13O60858 407 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 PYGLP06737 847 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 GCSHP23434 173 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 ATICP31939 592 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 EPHB4P54760 987 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 LILRA4P59901 499 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 SATB1Q01826 763 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 ZNF844Q08AG5 666 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 SURF1Q15526 300 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 PKN1Q16512 942 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 MGAT5BQ3V5L5 792 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 RAP1GAP2Q684P5 730 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 SLFN13Q68D06 897 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 MCTP1Q6DN14 999 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 SULT6B1Q6IMI4 303 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 DRICH1Q6PGQ1 229 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 LVRNQ6Q4G3 990 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 KCTD20Q7Z5Y7 419 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 GSPT2Q8IYD1 628 aaKnown RBP5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 CLASRPQ8N2M8 674 aaKnown RBP5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 GALNT15Q8N3T1 639 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 SYT8Q8NBV8 401 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 PNKPQ96T60 521 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 MESP1Q9BRJ9 268 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 MEGF9Q9H1U4 602 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 RAD54BQ9Y620 910 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 ADAMTS20P59510 1910 aa5.6□□□□□ -1.51
HMGB3P31-201ENST00000413333 HMGB1P1B2RPK0 211 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 IPO5O00410 1097 aaKnown RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 IRAK2O43187 625 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 USP1O94782 785 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 RASAL1O95294 804 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 TOB1P50616 345 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 ARL4CP56559 192 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 NHLH2Q02577 135 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 LMOD3Q0VAK6 560 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 TCF15Q12870 199 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 TAF12Q16514 161 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 TMTC4Q5T4D3 741 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 ARL6IP4Q66PJ3 421 aaKnown RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 FCRL6Q6DN72 434 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 OGFOD2Q6N063 350 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 TAF2Q6P1X5 1199 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 KIAA0408Q6ZU52 694 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 GAS2L3Q86XJ1 694 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 SYT12Q8IV01 421 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 FUKQ8N0W3 1084 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 TEX19Q8NA77 164 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 BHLHE22Q8NFJ8 381 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 LRIG1Q96JA1 1093 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 ZSCAN31Q96LW9 406 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 MPHOSPH9Q99550 1183 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 SMOC2Q9H3U7 446 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 XPNPEP3Q9NQH7 507 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 SHOC2Q9UQ13 582 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 USP15Q9Y4E8 981 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 RNF114Q9Y508 228 aa5.59□□□□□ -1.51
HMGB3P31-201ENST00000413333 CCDC195A0A1B0GUA6 201 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 NPEPPSL1A6NEC2 478 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 hCG_1984214I3L0E3 225 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 LEFTY2O00292 366 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 EIF3FO00303 357 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 TOR1BO14657 336 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 CCP110O43303 1012 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 RGS10O43665 173 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 COQ9O75208 318 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 ERN1O75460 977 aaKnown RBP5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 PIAS2O75928 621 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 ATXN1LP0C7T5 689 aaKnown RBP5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 SPATA31D3P0C874 917 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 GYS1P13807 737 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 PECAM1P16284 738 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 EGR1P18146 543 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 GCLCP48506 637 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 ZNF134P52741 427 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 FOXO1Q12778 655 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 NPY5RQ15761 445 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 ZNF124Q15973 351 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 MAPKAPK3Q16644 382 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 METTL24Q5JXM2 366 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 KLHL17Q6TDP4 642 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 CYP26C1Q6V0L0 522 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 SPATA31D4Q6ZUB0 917 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 RFX8Q6ZV50 586 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 SGMS1Q86VZ5 419 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 GATAD2AQ86YP4 633 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 BPIFB1Q8TDL5 484 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 MIEF2Q96C03 454 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 UBXN10Q96LJ8 280 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 ZSWIM1Q9BR11 485 aa5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 DHX36Q9H2U1 1008 aaKnown RBP5.58□□□□□ -1.52
HMGB3P31-201ENST00000413333 VSX1Q9NZR4 365 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms